PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG034127.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 196aa    MW: 22591 Da    PI: 5.2728
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG034127.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.38.9e-1582131554
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                  +++rr+ +NRe+ArrsR RK++ ++eL   v  L +eN++L +++++ ++
  CCG034127.1  82 RKQRRMLSNRESARRSRMRKQKHLDELWSQVVWLRNENHQLVDKVNHVSE 131
                  689****************************************9998776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.0E-1578142IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.58880143IPR004827Basic-leucine zipper domain
PfamPF001701.4E-1282131IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.75E-1482131No hitNo description
Gene3DG3DSA:1.20.5.1701.4E-1282155No hitNo description
CDDcd147029.16E-2083134No hitNo description
PROSITE patternPS00036085100IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
MQPNEITGLH YLVPPNSSPY SAHFSMTQDN SQMFQFNQFT NQSYNFQIPP QLQEFSLQAS  60
CISSHSTSDE ADEQQLSLIN ERKQRRMLSN RESARRSRMR KQKHLDELWS QVVWLRNENH  120
QLVDKVNHVS ECHDQVVQEN NKLKEEISEL RQVLTDMQLS SPYPSLKGLE DITCETAYLG  180
AESSNQSITS GSDLLG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
194101RRSRMRKQ
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2101390.0AC210139.1 Populus trichocarpa clone POP113-I04, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011012258.11e-144PREDICTED: basic leucine zipper 43-like
TrEMBLB9NC161e-131B9NC16_POPTR; BZIP family protein
STRINGPOPTR_0004s10990.11e-131(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16043399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.14e-49basic leucine-zipper 42