PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG033276.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family G2-like
Protein Properties Length: 133aa    MW: 15279.4 Da    PI: 10.3791
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG033276.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.21.4e-3161115155
      G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                  k r+rWt++LH+rFve v++LGG+ekAtPk il+ m+v+gLt+ hvkSHLQkYR+
  CCG033276.1  61 KIRVRWTQDLHKRFVESVNRLGGAEKATPKGILREMDVHGLTILHVKSHLQKYRT 115
                  569***************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.90458118IPR017930Myb domain
SuperFamilySSF466891.36E-1659115IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.5E-2860116IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-2461115IPR006447Myb domain, plants
PfamPF002492.6E-863114IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    Send to blast
MHVDNRFKDH QNHEVAYQPF TSQVTKPTSH FQPQMQPAYS PYDMTSGANN SVSLGATIKS  60
KIRVRWTQDL HKRFVESVNR LGGAEKATPK GILREMDVHG LTILHVKSHL QKYRTARYLP  120
ESKEGIKLYF VIS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A7e-2560118159Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B7e-2560118159Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A5e-2561118158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B5e-2561118158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C5e-2561118158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D5e-2561118158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A7e-2560118159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C7e-2560118159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D7e-2560118159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F7e-2560118159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H7e-2560118159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J7e-2560118159Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006369451.26e-86myb family transcription factor PHL5 isoform X3
RefseqXP_024448738.15e-85myb family transcription factor PHL5 isoform X1
RefseqXP_024448741.15e-85myb family transcription factor PHL5 isoform X2
SwissprotQ0WVU32e-31PHL5_ARATH; Myb family transcription factor PHL5
TrEMBLA0A3N7EBF71e-84A0A3N7EBF7_POPTR; Uncharacterized protein
TrEMBLA0A3N7EDN91e-83A0A3N7EDN9_POPTR; Uncharacterized protein
TrEMBLA0A3N7FU151e-83A0A3N7FU15_POPTR; Uncharacterized protein
STRINGPOPTR_0001s23560.13e-87(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1787557
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.23e-34G2-like family protein