PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG033187.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 155aa    MW: 17387.4 Da    PI: 6.8081
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG033187.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.58.3e-153087562
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62
                 ++ +r+++NRe+ArrsR RK++ ++ L   v +L++eN++ +  ++  ++ + +++++
  CCG033187.1 30 RKRKRMISNRESARRSRMRKQKHLDDLMAQVSQLSKENHQIITGINITTQRYLSVEAD 87
                 6789************************************999888888777776665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.5E-121970No hitNo description
SMARTSM003385.5E-192690IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.1972870IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.13E-133082No hitNo description
PfamPF001701.0E-113074IPR004827Basic-leucine zipper domain
CDDcd147021.78E-193181No hitNo description
PROSITE patternPS0003603348IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    Send to blast
MASSSGTSSG SSLIQNSGSE EDLQALMDQR KRKRMISNRE SARRSRMRKQ KHLDDLMAQV  60
SQLSKENHQI ITGINITTQR YLSVEADNSI LRVQISELSN RLESLNEIIG SLNSNNGVFG  120
DSSTFNEPAA DSFLNPWNMA YLNQPIMASA EMFHY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12950RKRKRMISNRESARRSRMRKQK
24249RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011037478.11e-110PREDICTED: ocs element-binding factor 1-like
SwissprotC0Z2L57e-50BZP44_ARATH; bZIP transcription factor 44
TrEMBLB9H0U01e-107B9H0U0_POPTR; BZIP family protein
STRINGPOPTR_0004s16560.11e-108(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61334147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.12e-48basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]