PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG033122.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family BES1
Protein Properties Length: 319aa    MW: 34204.2 Da    PI: 8.1552
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG033122.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822207.73.1e-6421441149
       DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqssl 98 
                  ++++r ptwkErEnnkrRERrRRaiaaki++GLR++Gn+klpk++DnneVlkALc+eAGw ve+DGttyrkg+k  e+++++g sa+asp+ss+    
  CCG033122.1   2 TSGTRLPTWKERENNKRRERRRRAIAAKIFSGLRMYGNFKLPKHCDNNEVLKALCNEAGWAVEPDGTTYRKGCKTAEHMDIIGGSATASPCSSYL--- 96 
                  5899*****************************************************************************************88... PP

       DUF822  99 kssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsss 149
                       +sp++sy++sp sssfps++s++ + +a+   +sllp+l++ls++sss
  CCG033122.1  97 -----PSPCASYNPSPGSSSFPSSVSSSYAANANVddNSLLPWLKNLSSASSS 144
                  .....******************98877766654456**********998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056875.2E-633139IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FSGLRMYGNF KLPKHCDNNE VLKALCNEAG  60
WAVEPDGTTY RKGCKTAEHM DIIGGSATAS PCSSYLPSPC ASYNPSPGSS SFPSSVSSSY  120
AANANVDDNS LLPWLKNLSS ASSSKLPHLY IHGGSISAPV TPPLSSPTAR TPRIKAGWED  180
QPIHPGWCGQ HYLPSSTPPS PGRQIVPDPG WFAGIRLPQG GPTSPTFSLV APNSFGFKEE  240
AFAGGGSRMW TPGQSGTCSP AIAAGSDHTA DIPMAEVISD EFAFRCNATG LVKPWEGERI  300
HEECGSDDLE LTLGNSRTR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-21675372441Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-21675372441Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-21675372441Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-21675372441Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1454330.0EF145433.1 Populus trichocarpa clone WS01124_K11 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011044050.10.0PREDICTED: BES1/BZR1 homolog protein 4-like
SwissprotQ9ZV881e-134BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLB9I1R50.0B9I1R5_POPTR; Uncharacterized protein
STRINGPOPTR_0001s39520.11e-169(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26613375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-113BES1/BZR1 homolog 4