PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CCG033103.1

Organism

Populus euphratica

Taxonomic ID

75702

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus

Family

bHLH

Protein Properties

Length: 228aa MW: 25333.4 Da PI: 10.3231

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CCG033103.1	genome	LZU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.3	6.5e-14	60	106	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+++E +RR+riN+ f++Lr++lP++ K++Ka++Le++++++k+L CCG033103.1 60 KKHSMAESNRRSRINTQFATLRTILPNL-----IKVNKASVLEETIRCVKEL 106 68***********************9.....6**************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	14.126	57	106	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	8.7E-11	60	106	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	4.27E-9	60	111	No hit	No description
Gene3D	G3DSA:4.10.280.10	4.5E-13	61	115	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	4.97E-13	61	124	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	2.1E-9	63	112	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF55021	2.24E-6	145	217	No hit	No description
Gene3D	G3DSA:3.30.70.260	7.5E-7	148	217	No hit	No description
CDD	cd04873	6.59E-6	148	207	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence Send to blast
MALRQIHDVQ PLSSHSNSAG TCSNQDDFRQ ALLNSINETT YNNSMTKQLI SEESKLVAAK 60 KHSMAESNRR SRINTQFATL RTILPNLIKV NKASVLEETI RCVKELTNTV SELKEIYGGG 120 RLECVFPGGA DKLRIGSCKG KGQEVVKVVF SCDDKRKLLS DVARAVRSVK GKVVRAEMVT 180 MGGRTKCVLW VQGINGNEEL EMLRRVLNAL TEKPNMARTC NRPKLTLL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011021839.1	1e-168	PREDICTED: transcription factor bHLH131-like
Swissprot	P0CB25	1e-43	BH131_ARATH; Transcription factor bHLH131
TrEMBL	A0A2K1ZM96	1e-160	A0A2K1ZM96_POPTR; Uncharacterized protein
STRING	POPTR_0007s14360.1	1e-158	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF12611	30	32

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38070.1	3e-43	bHLH family protein