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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CCG031902.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family | bZIP | ||||||||
Protein Properties | Length: 247aa MW: 27521.4 Da PI: 9.3727 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 26.2 | 1.7e-08 | 210 | 232 | 4 | 26 |
XCHHHCHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKka 26 ++r +r++kNRe+A rsR+RK++ CCG031902.1 210 DRRHKRMIKNRESAARSRARKQE 232 689*******************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07716 | 1.6E-4 | 210 | 232 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.52E-5 | 211 | 233 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 6.0E-5 | 211 | 232 | No hit | No description |
CDD | cd14707 | 4.12E-13 | 211 | 232 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 214 | 229 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence Send to blast |
MLSPTNCEGI SSNNKTKSPR KVSSSISSKS SSTSSSPLIF SASNNLHCQA QQKAETMEEV 60 WKDISLASLH EHTSTDQELS MTPRLHNISH HHRHHHHHHN NNSPNFILQD FLARPFNKDP 120 PTGMVSIIRD STPFGSSVPP PATVLSLNSG PGFDFLENSD HPQRPDSQLQ SNPISNISSF 180 TSPFEGLDSS PGLPSFCKKR TQESDGSSGD RRHKRMIKNR ESAARSRARK QESPFLFKDS 240 FSNMYRC |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor required for the transition to flowering promoted by FT. {ECO:0000269|PubMed:16099979, ECO:0000269|PubMed:16099980}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011043136.1 | 1e-168 | PREDICTED: protein FD | ||||
Swissprot | Q84JK2 | 4e-37 | FD_ARATH; Protein FD | ||||
TrEMBL | A0A2K2AF21 | 1e-108 | A0A2K2AF21_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0005s11140.1 | 1e-136 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3755 | 32 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 3e-37 | bZIP family protein |