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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
CCG031566.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
NAC |
Protein Properties |
Length: 255aa MW: 28975.8 Da PI: 9.3492 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
CCG031566.1 | genome | LZU | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 167.5 | 4.6e-52 | 14 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97
lppGfrFhPtdeelvv+yLk+kv + +l++ ++i+evd++k++PwdLp e+e yfFs+r+ ky++g+r+nrat sgyWkatg dk+++++ ++
CCG031566.1 14 LPPGFRFHPTDEELVVQYLKRKVFACPLPA-SIIPEVDVCKSDPWDLPGD---LEQERYFFSTREAKYPNGNRSNRATGSGYWKATGIDKQIVTSkGN 107
79****************************.89***************54...46799*********************************9988577 PP
NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128
++vg+kktLvfy+g+ p+g++tdW+mheyrl
CCG031566.1 108 QAVGMKKTLVFYRGKPPHGTRTDWIMHEYRL 138
78***************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 255 aa
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to blast |
MEKLNFVKNG AVRLPPGFRF HPTDEELVVQ YLKRKVFACP LPASIIPEVD VCKSDPWDLP 60 GDLEQERYFF STREAKYPNG NRSNRATGSG YWKATGIDKQ IVTSKGNQAV GMKKTLVFYR 120 GKPPHGTRTD WIMHEYRLAS TETAACNALL NKNSIQGSVV VPMENWVLCR IFLKKRSTKN 180 EEENMQFGND NRLSKLRTTK PVFYDFMTKH RTTDLNLAPS SSSGSSGITE VSCNESDDHE 240 ESSSCNSFPY FRRKP
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 2e-51 | 12 | 179 | 15 | 170 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-51 | 12 | 179 | 15 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-51 | 12 | 179 | 15 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-51 | 12 | 179 | 15 | 170 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-51 | 12 | 179 | 18 | 173 | NAC domain-containing protein 19 |
3swm_B | 2e-51 | 12 | 179 | 18 | 173 | NAC domain-containing protein 19 |
3swm_C | 2e-51 | 12 | 179 | 18 | 173 | NAC domain-containing protein 19 |
3swm_D | 2e-51 | 12 | 179 | 18 | 173 | NAC domain-containing protein 19 |
3swp_A | 2e-51 | 12 | 179 | 18 | 173 | NAC domain-containing protein 19 |
3swp_B | 2e-51 | 12 | 179 | 18 | 173 | NAC domain-containing protein 19 |
3swp_C | 2e-51 | 12 | 179 | 18 | 173 | NAC domain-containing protein 19 |
3swp_D | 2e-51 | 12 | 179 | 18 | 173 | NAC domain-containing protein 19 |
4dul_A | 2e-51 | 12 | 179 | 15 | 170 | NAC domain-containing protein 19 |
4dul_B | 2e-51 | 12 | 179 | 15 | 170 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcriptional repressor that negatively regulates the expression of genes involved in xylem vessel formation. Represses the transcriptional activation activity of NAC030/VND7, which regulates protoxylem vessel differentiation by promoting immature xylem vessel-specific genes expression (PubMed:20388856). Transcriptional activator that regulates the COLD-REGULATED (COR15A and COR15B) and RESPONSIVE TO DEHYDRATION (LTI78/RD29A and LTI65/RD29B) genes by binding directly to their promoters. Mediates signaling crosstalk between salt stress response and leaf aging process (PubMed:21673078). May play a role in DNA replication of mungbean yellow mosaic virus (PubMed:24442717). {ECO:0000269|PubMed:20388856, ECO:0000269|PubMed:21673078, ECO:0000269|PubMed:24442717}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By abscisic acid (ABA) and salt stress. {ECO:0000269|PubMed:21673078}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KP770012 | 0.0 | KP770012.1 Populus tomentosa apical meristem (NAM) family protein (Potri.001G061200) mRNA, complete cds. |