PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG031326.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 488aa    MW: 54482 Da    PI: 7.3508
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG031326.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.91.2e-09202243445
                  XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                   k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  CCG031326.1 202 QKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 243
                  5888*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-8199262IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415201245IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.5E-7203246No hitNo description
CDDcd147081.50E-21203255No hitNo description
PfamPF001709.6E-7203243IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.7E-7204247No hitNo description
PROSITE patternPS000360206221IPR004827Basic-leucine zipper domain
PfamPF141447.4E-33285360IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 488 aa     Download sequence    Send to blast
MGRRTDAEDE KKAVGMPSFD PQLPISNAIV ERSTVHPYRV NDFGVFLEDS AIDLSVGTVF  60
NSAKESTQAI PSDRLHSGTF EKKQSTTSFN IKSSASQVES HRLPLEKVLQ SNQVSIPIVV  120
DTENWGENRR LPLEKVQQSN RVSIPSVNTE NWGEANMADG SPRTDISTDA DTDDKNQRYD  180
RGQSTALVAS DSSDRTRDKM DQKTLRRLAQ NREAARKSRL RKKAYVQQLE SSRLKLTQLE  240
QELQRARQQG IFISSSGDQT HSMSGNGAMA FDVEYARWLE EQNRQINELR SAVNSHAGDA  300
ELRIIIDGIM AHYDEVFKLK SNAAKADVFH LLSGMWKTPA ERCFLWLGGF RSSELLKLLM  360
NQLEPLTEQQ LVGIGNLQQS SQQAEDALSQ GMEALQQSLS ETLSSGSLGS SGSSGNVANY  420
MGQMAMAMGK LGTLEGFIRQ ADNLRQQTLQ QMHRILTTRQ SARALLAIHD YFSRLRALSS  480
LWLARPKE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011020425.10.0PREDICTED: transcription factor TGA2-like isoform X2
RefseqXP_011020429.10.0PREDICTED: transcription factor TGA2-like isoform X2
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A2K2B9N10.0A0A2K2B9N1_POPTR; Uncharacterized protein
STRINGPOPTR_0003s19410.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-164TGACG motif-binding factor 6