PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CCG031135.3

Organism

Populus euphratica

Taxonomic ID

75702

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus

Family

bZIP

Protein Properties

Length: 310aa MW: 35249.3 Da PI: 8.8375

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CCG031135.3	genome	LZU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	36	1.5e-11	27	56	4	33
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLee 33 l+++rr+++NReAAr+sR+RKka++++Le CCG031135.3 27 LQVQRRLAQNREAARKSRLRKKAYVQQLES 56 789*************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF00170	3.9E-9	27	56	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	5.3E-8	30	60	No hit	No description
SuperFamily	SSF57959	4.25E-7	30	63	No hit	No description
PROSITE pattern	PS00036	0	31	46	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	7.3E-27	114	189	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence Send to blast
MTTKKLTLRV LSEKYEYLLR NRTCECLQVQ RRLAQNREAA RKSRLRKKAY VQQLESSRVM 60 LIQLEQEVDR ARQQGLYMGG GADASQLGFG GPTNSGIATF EMEYGHWLEE QNRHICDMRT 120 ALNAHISDVE LRMLVESDMS LYSELFRLKA TAAKADVSYV MSGLWKSSAE RFFLWVGGFR 180 PSKLLQILKP WMEPLTEQQR EHVQNLGQSC QQAEEALSQG LEKVQQSVAE AVAAGQFGEA 240 SYSPHMETAM EKLEFLARFV QQTIQAADIF QAASYNWKVL DINSHSIKRK LVVKSIFSAA 300 TVLPSNDISR

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011025631.1	1e-149	PREDICTED: transcription factor TGA1-like
Refseq	XP_011025632.1	1e-149	PREDICTED: transcription factor TGA1-like
Swissprot	Q39237	1e-113	TGA1_ARATH; Transcription factor TGA1
TrEMBL	A0A2K1ZRC0	1e-144	A0A2K1ZRC0_POPTR; BZIP family protein
STRING	POPTR_0007s06180.1	1e-144	(Populus trichocarpa)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65210.6	1e-116	bZIP family protein

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Herrera-Vásquez A, et al. Transcriptional Control of Glutaredoxin GRXC9 Expression by a Salicylic Acid-Dependent and NPR1-Independent Pathway in Arabidopsis. Plant Mol. Biol. Rep., 2018. [PMID:26696694] Gutsche N,Zachgo S The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding. PLoS ONE, 2016. 11(4): p. e0153810 [PMID:27128442] Sun T, et al. TGACG-BINDING FACTOR 1 (TGA1) and TGA4 regulate salicylic acid and pipecolic acid biosynthesis by modulating the expression of SYSTEMIC ACQUIRED RESISTANCE DEFICIENT 1 (SARD1) and CALMODULIN-BINDING PROTEIN 60g (CBP60g). New Phytol., 2018. 217(1): p. 344-354 [PMID:28898429]