PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG030202.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family WRKY
Protein Properties Length: 473aa    MW: 51667.4 Da    PI: 5.2099
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG030202.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY79.82.9e-25209265259
                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                   DgynWrKYGqK+vk+ + +rsYY+Ct+++C++kk +e+s++ ++v+ei+++g H h+
  CCG030202.1 209 PDGYNWRKYGQKQVKSPKGSRSYYKCTYSDCCAKK-IECSDHSGRVIEIVNKGMHSHP 265
                  5********************************98.*********************8 PP
2WRKY46.85.8e-153563922359
                  EEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY  23 sYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  +YYrCtsagCpv+k++e++ +++++v+itY+g H+h+
  CCG030202.1 356 NYYRCTSAGCPVRKHIETAVDNTNAVIITYKGVHDHD 392
                  7***********************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081116.076203267IPR003657WRKY domain
SuperFamilySSF1182904.58E-19204266IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.5E-18204265IPR003657WRKY domain
SMARTSM007745.9E-23208266IPR003657WRKY domain
PfamPF031069.6E-17210265IPR003657WRKY domain
SMARTSM007741.5E-7337393IPR003657WRKY domain
PROSITE profilePS5081117.706352394IPR003657WRKY domain
SuperFamilySSF1182905.23E-12355394IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.4E-13355394IPR003657WRKY domain
PfamPF031065.3E-9356391IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 473 aa     Download sequence    Send to blast
MAESESFEAL EVQNNEQKRQ GNEQNNGNFV EEEELEGDCI GEEEESQLSE LQQLVELPSS  60
QVEEEMREGQ VETLTGVPSS STAILSKEND QHVDDLAGLK GNSALKTHVE PEFKEQVGLS  120
QQEVLGSVTA QSAKSQTQNQ LPPSACPTSS SELSLTSVTQ PIPSAPSPTP PEKRLSPPEV  180
KNACIPEAGH QSSAKLKALH VPVARTSIPD GYNWRKYGQK QVKSPKGSRS YYKCTYSDCC  240
AKKIECSDHS GRVIEIVNKG MHSHPPRKNN STRESRSGLS VGPILQTTVT ERTVRMLKDS  300
EPVTLSMEPA QETLTVSERK RQSSSSSDEN KETQNKEEDV GEPEPKRRQV FPSIWNYYRC  360
TSAGCPVRKH IETAVDNTNA VIITYKGVHD HDMPVPKKRH GPPSAPLPAA AASSSSLPLK  420
KTDTLQNQVA STQWSVGKEG ELTGETLDLG GEKEAAIESA RTLLSIGFEI KPC
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1481810.0EF148181.1 Populus trichocarpa clone WS0128_G14 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011033408.10.0PREDICTED: probable WRKY transcription factor 32 isoform X1
TrEMBLA0A2K2A4990.0A0A2K2A499_POPTR; Uncharacterized protein
STRINGPOPTR_0018s11630.11e-179(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51983456
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.12e-72WRKY DNA-binding protein 32