PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG029799.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 229aa    MW: 25238.3 Da    PI: 6.1672
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG029799.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.41.8e-0986129851
                  HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   8 rrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                  +r + NReA r++R++Kka ++ Lee++k+L   N++L k++++
  CCG029799.1  86 KRPAGNREAVRKYREKKKAHTAYLEEEIKKLHLLNQQLVKKIQR 129
                  78889************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.5E-1277147No hitNo description
SMARTSM003382.3E-979146IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.73781147IPR004827Basic-leucine zipper domain
PfamPF077168.4E-1382129IPR004827Basic-leucine zipper domain
CDDcd146863.23E-1085137No hitNo description
SuperFamilySSF579593.88E-785129No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MDDGEVEVSD HVLLPDPGAS GSLQCSGSVD SLLDELLKNT RTCTHTHTCN PPGPDAIHTH  60
TCYHTHTQVI ASEEDVNPDN REHSRKRPAG NREAVRKYRE KKKAHTAYLE EEIKKLHLLN  120
QQLVKKIQRQ AILEAEVLRL RSILVDLRGK IDTELGVFPF QNQCNTTTVL KEGDCGAQST  180
GGLMNLQCQS DSPCFRTPTI VNCQANTNNT ADAAMDMVEA IVPSASQAQ
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1466300.0EF146630.1 Populus trichocarpa clone WS01210_O17 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011042101.11e-172PREDICTED: uncharacterized protein LOC105137881 isoform X1
RefseqXP_011042102.11e-172PREDICTED: uncharacterized protein LOC105137881 isoform X1
TrEMBLA9PE841e-133A9PE84_POPTR; Uncharacterized protein
STRINGPOPTR_0003s20320.11e-134(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF25673277
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16770.12e-45bZIP family protein