PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG029141.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 288aa    MW: 30934.5 Da    PI: 6.4237
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG029141.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1353.2e-11224275556
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                  kr++r   NR +A rs +RK  +i+eLe+kv++L++e ++L  +l  l+  +
  CCG029141.1 224 KRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQASC 275
                  9*****************************************9999998766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.2E-11220285IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.887222272IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.9E-11224275No hitNo description
PfamPF001704.5E-10224274IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.83E-11224275No hitNo description
CDDcd147039.69E-26225276No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MDKDKSASHH SSGLPPPPGR YSSFSPSGSS FNLKPEQSPS TYPPMAPGSS SDPNHFGHGS  60
DSNRFSHDIS RMPDNPPKNL GHRRAHSEIL TLPDDISFDS DLGVVGGGAD GPTFSDETEE  120
DLLSMYLDMD KFNSSSATSS FQVGESLAPA MAAQAMAPLS ATVNLGAGPS ERPRVRHQHS  180
QSMDGSTTIK PEMLMSGSEE ASPADSKKAV SAAKLAELAL IDPKRAKRIW ANRQSAARSK  240
ERKMRYIAEL ERKVQTLQTE ATSLSAQLTL LQASCISSLL FICELFLV
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor with an activatory role.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00126DAPTransfer from AT1G06070Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011037122.10.0PREDICTED: probable transcription factor PosF21 isoform X1
SwissprotQ040881e-111POF21_ARATH; Probable transcription factor PosF21
TrEMBLU5FMQ71e-173U5FMQ7_POPTR; Uncharacterized protein
STRINGPOPTR_0017s05610.11e-174(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55173249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.11e-107bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Xu C, et al.
    Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration.
    Nat Plants, 2018. 4(2): p. 108-115
    [PMID:29358751]