PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus

Family

bZIP

Protein Properties

Length: 288aa MW: 30934.5 Da PI: 6.4237

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CCG029141.1	genome	LZU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35	3.2e-11	224	275	5	56
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l l+ + CCG029141.1 224 KRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQASC 275 9*****************************************9999998766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	5.2E-11	220	285	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.887	222	272	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	3.9E-11	224	275	No hit	No description
Pfam	PF00170	4.5E-10	224	274	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.83E-11	224	275	No hit	No description
CDD	cd14703	9.69E-26	225	276	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence Send to blast
MDKDKSASHH SSGLPPPPGR YSSFSPSGSS FNLKPEQSPS TYPPMAPGSS SDPNHFGHGS 60 DSNRFSHDIS RMPDNPPKNL GHRRAHSEIL TLPDDISFDS DLGVVGGGAD GPTFSDETEE 120 DLLSMYLDMD KFNSSSATSS FQVGESLAPA MAAQAMAPLS ATVNLGAGPS ERPRVRHQHS 180 QSMDGSTTIK PEMLMSGSEE ASPADSKKAV SAAKLAELAL IDPKRAKRIW ANRQSAARSK 240 ERKMRYIAEL ERKVQTLQTE ATSLSAQLTL LQASCISSLL FICELFLV

Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor with an activatory role.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00126	DAP	Transfer from AT1G06070	Download

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011037122.1	0.0	PREDICTED: probable transcription factor PosF21 isoform X1
Swissprot	Q04088	1e-111	POF21_ARATH; Probable transcription factor PosF21
TrEMBL	U5FMQ7	1e-173	U5FMQ7_POPTR; Uncharacterized protein
STRING	POPTR_0017s05610.1	1e-174	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF5517	32	49

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06070.1	1e-107	bZIP family protein

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Xu C, et al. Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration. Nat Plants, 2018. 4(2): p. 108-115 [PMID:29358751]