PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG028844.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 329aa    MW: 36882.7 Da    PI: 6.6744
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG028844.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.22.7e-11203248550
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                  kr +r   NR +A+rsR RK+++i eLe+ v +L++e +aL  ++ 
  CCG028844.1 203 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVA 248
                  899**********************************999987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.1E-14199263IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.703201253IPR004827Basic-leucine zipper domain
PfamPF001706.9E-10203248IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.5E-12203254No hitNo description
SuperFamilySSF579598.84E-12203257No hitNo description
CDDcd147033.70E-23204254No hitNo description
PROSITE patternPS000360206221IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MAQLPPKIPA VTQNWPSFSH QTMSNYFSNA AATMENHQPC WVDEFLDFTS TRRGSHRRSI  60
SDCITFIETT NMPSLVEDQC HDNNSSSCNN NHSSSSALIS ANLGFDKLDD DQLMSMFSHD  120
MSLSLPPSSS NPSTPSDQNS KNDEKPSMPT DQHHHQEEGN TEKQQAAVAK TEPGEVESSC  180
KQEPHQPPLP TSSNNGDTIN DPKRVKRILA NRQSAQRSRV RKLQYISELE RSVTTLQTEV  240
SALSPRVAFL DHQRLILNVD NSALKQRIAA LAQDKIFKDA HQEALKKEIE RLRQVYHQQN  300
LKKMNSSSHA ASAAREQSPN HEAIQCSEN
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2176440.0AC217644.1 Populus trichocarpa clone POP037-C20, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011010297.10.0PREDICTED: basic leucine zipper 61-like isoform X2
SwissprotQ9M2K41e-104BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A2K2C9Y20.0A0A2K2C9Y2_POPTR; Uncharacterized protein
STRINGPOPTR_0001s38320.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20113488
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.13e-98bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]