PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG028757.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 306aa    MW: 33920.2 Da    PI: 4.3013
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG028757.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_121.45.7e-07144185546
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                  k+  r  +N+ AA rsR+RKk ++  Le k+  Le+e ++L 
  CCG028757.1 144 KKRSRQLRNKDAAVRSRERKKLYVRDLEIKSRYLEGECRRLD 185
                  88899********************************98775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0075134204IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.048142199IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.5E-9144199No hitNo description
Gene3DG3DSA:1.20.5.1702.6E-8144202No hitNo description
CDDcd147043.56E-15145196No hitNo description
PROSITE patternPS000360148162IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0030968Biological Processendoplasmic reticulum unfolded protein response
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MEFLEGDDVL GQIDWDNLLD GLPDSDSIFE LEPPLTTDLQ PINDSSNSSP PSTVSSWIGE  60
VETLLMKDDD DKVDQLENCN AFLADILVDS PSAHESGGEV LDATTDKDST SSDDADGVPK  120
EKDDGAEEKN NNDEEEDPDD IISKKRSRQL RNKDAAVRSR ERKKLYVRDL EIKSRYLEGE  180
CRRLDRLLQC FIAENHALRL SLQRGNAFGV TSAKQESAVL LLESLLLGSL LWLLGIMCLF  240
PQPAMPQSTL VEVLLETMEK KAPESVAQRG AGSKIFISLA NSRRCKASRP RMKLTGVIFP  300
SINLVL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00019PBMTransfer from AT1G42990Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCU2278300.0CU227830.1 Populus EST from severe drought-stressed leaves.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011041134.10.0PREDICTED: bZIP transcription factor 60
TrEMBLB9H5X30.0B9H5X3_POPTR; Uncharacterized protein
STRINGPOPTR_0005s27930.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF120093032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.12e-27basic region/leucine zipper motif 60