PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CCG028683.2

Organism

Populus euphratica

Taxonomic ID

75702

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus

Family

bZIP

Protein Properties

Length: 479aa MW: 52055.8 Da PI: 7

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CCG028683.2	genome	LZU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.2	5.4e-16	270	325	3	58
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 + kr rr+ +NRe+ArrsR RK+a + eLe+ v++L eN++L k+l +++++ + CCG028683.2 270 DAKRVRRMLSNRESARRSRSRKQAHLTELETQVAQLRVENSSLLKRLTDISQKYNE 325 579*****************************************999999998875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.1E-19	268	332	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	4.2E-12	269	323	No hit	No description
PROSITE profile	PS50217	11.565	270	325	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.2E-13	271	323	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.05E-11	272	322	No hit	No description
CDD	cd14702	2.17E-6	273	324	No hit	No description
Pfam	PF12498	6.8E-48	339	466	IPR020983	Basic leucine-zipper, C-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence Send to blast
MERVFSVEDN ITEHFWSPPP PEDLSKMNRS ESEWAFERFL QEASAATLDD NASSNSSADK 60 TDVVQIKDHG NSNNNATSKC SFSNGTCATA ASSFGAPAII PVESDDYHTF LKSKLNLACA 120 AVALTRLNVE IPHGVGYKVC AFVGSVKESN FFHKRKLSIE MKEWPGPQQA SAVASFVKPL 180 DSPATAESGS QASNTSHLGS HAPSKGAGYD LLRSQDKDAN EPLGTPSLPS MQRKSAVTVK 240 PTTSVSSREL SEDDENEAET ELTENMHPTD AKRVRRMLSN RESARRSRSR KQAHLTELET 300 QVAQLRVENS SLLKRLTDIS QKYNESAVDN RVLKADVETL RAKVKMAEET VKRFTGLNTM 360 FPAMPDISTM IRPSFDGSPS DTAADAAVPV QDDPKHHFYQ APNNPKTTHD SRPRGNNVLS 420 DISSVENVQP NPVPAAGASG NKMGRAPSLQ RVASLEHLQK RIRGGASPCG PQSNGEQAK

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence Send to blast

MERVFSVEDN ITEHFWSPPP PEDLSKMNRS ESEWAFERFL QEASAATLDD NASSNSSADK  60
TDVVQIKDHG NSNNNATSKC SFSNGTCATA ASSFGAPAII PVESDDYHTF LKSKLNLACA  120
AVALTRLNVE IPHGVGYKVC AFVGSVKESN FFHKRKLSIE MKEWPGPQQA SAVASFVKPL  180
DSPATAESGS QASNTSHLGS HAPSKGAGYD LLRSQDKDAN EPLGTPSLPS MQRKSAVTVK  240
PTTSVSSREL SEDDENEAET ELTENMHPTD AKRVRRMLSN RESARRSRSR KQAHLTELET  300
QVAQLRVENS SLLKRLTDIS QKYNESAVDN RVLKADVETL RAKVKMAEET VKRFTGLNTM  360
FPAMPDISTM IRPSFDGSPS DTAADAAVPV QDDPKHHFYQ APNNPKTTHD SRPRGNNVLS  420
DISSVENVQP NPVPAAGASG NKMGRAPSLQ RVASLEHLQK RIRGGASPCG PQSNGEQAK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	284	291	RRSRSRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	EF148294	0.0	EF148294.1 Populus trichocarpa x Populus deltoides clone WS01312_M14 unknown mRNA.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011038579.1	0.0	PREDICTED: light-inducible protein CPRF2-like isoform X2
Swissprot	Q99090	1e-124	CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBL	A0A2K1Y0Q8	0.0	A0A2K1Y0Q8_POPTR; Uncharacterized protein
STRING	POPTR_0013s03800.1	0.0	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF4176	33	58

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	3e-65	bZIP family protein

Publications ? help Back to Top
Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness. EMBO J., 1991. 10(7): p. 1777-86 [PMID:2050115]