PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG028616.2
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family G2-like
Protein Properties Length: 1150aa    MW: 129316 Da    PI: 6.3328
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG028616.2genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like75.47.9e-24927971145
      G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtleh 45 
                  kpr+rWtpeLHe+Fveav+qLGGse+AtPk +l++m+v+gLt++h
  CCG028616.2 927 KPRMRWTPELHEAFVEAVDQLGGSERATPKGVLKHMNVEGLTIYH 971
                  79*****************************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS51580191.6481744IPR025776Histone-lysine N-methyltransferase SUVR4/SUVR1/SUVR2
PfamPF104401.4E-16359IPR018848WIYLD domain
SuperFamilySSF821997.36E-51332428No hitNo description
Gene3DG3DSA:2.170.270.103.8E-68332427No hitNo description
SMARTSM004681.2E-18339481IPR007728Pre-SET domain
PfamPF050337.6E-13342489IPR007728Pre-SET domain
PROSITE profilePS508678.784395494IPR007728Pre-SET domain
Gene3DG3DSA:2.170.270.103.8E-68467593No hitNo description
SuperFamilySSF821997.36E-51470592No hitNo description
SMARTSM003175.6E-27497684IPR001214SET domain
PROSITE profilePS5028016.873497678IPR001214SET domain
PfamPF008563.7E-14509678IPR001214SET domain
SuperFamilySSF821991.44E-15639701No hitNo description
Gene3DG3DSA:2.170.270.103.8E-68640701No hitNo description
SuperFamilySSF466893.4E-10925971IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.2E-20926971IPR009057Homeodomain-like
TIGRFAMsTIGR015575.8E-15927970IPR006447Myb domain, plants
PfamPF002491.5E-5929969IPR001005SANT/Myb domain
PfamPF143797.4E-2410031049IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0034968Biological Processhistone lysine methylation
GO:0005730Cellular Componentnucleolus
GO:0009506Cellular Componentplasmodesma
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
GO:0018024Molecular Functionhistone-lysine N-methyltransferase activity
Sequence ? help Back to Top
Protein Sequence    Length: 1150 aa     Download sequence    Send to blast
MANRERASCA FKATRALGIR DEEVKPVLLN LLKLFDMKWE LIEAEDYRAL IDAYFESKES  60
KMGSDEKSLM EHSVYERPSK IPHLEQQKDQ ISSSTDSLSP VEKMIFSSMA PKDSTCKGAS  120
CAFSSEQLAV EPRSSHPRKE KMPSNCHTRV FIKQRTKQSV SDEADFAEPP AAVHPVFQGS  180
FVGSTNGNNL VTRLGSQCDA SSSKDRMYCN SNVLIASSTS GEVKISLNCD SAVRCQNFKV  240
PDFNSVLKYL EDKYLKTHKL VTPEFSMKTL FKDLCECYVQ VGQLHDPLPN NKALRIDNSD  300
MVVDKKASSS FRLPHSSKNL LKAKHKATAC DKKRSVRSLN DITKGAENVK ISLVDESGNE  360
DFPKFTYIPQ NIIYQNAYVQ ISLARIADVD CCSSCSGDCL SSRIPCACAR ETGGEFAYTP  420
KGLLKDDFLT ACVCMRRAPK KDHFVYCQDC PLERSKNEDL PEPCKGHLLR KFIKECWRKC  480
GCHMTCGNRV VQRGITCDLQ VFMTPQGKGW GLRTLQDLPK GSFICEYVGE ILTNTELYER  540
NIQIQNRGNN RHTYPVTLDA DWGSEKVLRD EEALCLDATF SGNVARFINH SISTCVTDNM  600
NGIKGRPKSS IKMNRNRSRA MTNFLKDKGE EEASLLCHDG NLIDIPVEVE TPDRHYYHLA  660
FFTTRDVTAS EELTWDYGID FDDYDHPIKA FRCSCGSAYC RVLPTAVEEK HPNLLCSFQV  720
SLEREMMRDS ASQQASPLSP GSRSVGPLFS SSSRFSNDMR VSSVSPQGKQ SHNSPFISQS  780
LRDRGNFTPA HDSHSEVQTT EFIACSDENK DLSWPVDPLQ DLLDLAENVH VQNGQVESSA  840
GVFASEDHAK RTDWQEWADQ LISVDDELEP NWSEILNDVN KKDSRQKELK PSPNISVQQP  900
PIHQHQTAHS GEVCGVANPL SAAPTTKPRM RWTPELHEAF VEAVDQLGGS ERATPKGVLK  960
HMNVEGLTIY HKYRSARYKP ESSDEKKTSP IEEMKSLDLK TSMGITEALR LQMEVQKRLH  1020
EQLEIQRNLQ LRIEEQGRYL QEMFEKQRKI EDDKSKAPSS SQEDPSLLQA KLEQSSANNK  1080
LEASELDLVK TSNESALLEE SSQSISRKQK APEERNDQVL DQIDEESSPA PIKRPRRDET  1140
AEVSTGAASN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2igq_A2e-2734170132283euchromatic histone methyltransferase 1
2igq_B2e-2734170132283euchromatic histone methyltransferase 1
2rfi_A2e-2734170132283Histone-lysine N-methyltransferase, H3 lysine-9 specific 5
2rfi_B2e-2734170132283Histone-lysine N-methyltransferase, H3 lysine-9 specific 5
3mo0_A2e-2734170132283Histone-lysine N-methyltransferase, H3 lysine-9 specific 5
3mo0_B2e-2734170132283Histone-lysine N-methyltransferase, H3 lysine-9 specific 5
3mo2_A2e-2734170132283Histone-lysine N-methyltransferase, H3 lysine-9 specific 5
3mo2_B2e-2734170132283Histone-lysine N-methyltransferase, H3 lysine-9 specific 5
3mo2_C2e-2734170132283Histone-lysine N-methyltransferase, H3 lysine-9 specific 5
3mo2_D2e-2734170132283Histone-lysine N-methyltransferase, H3 lysine-9 specific 5
3mo5_A2e-2734170132283Histone-lysine N-methyltransferase, H3 lysine-9 specific 5
3mo5_B2e-2734170132283Histone-lysine N-methyltransferase, H3 lysine-9 specific 5
3mo5_C2e-2734170132283Histone-lysine N-methyltransferase, H3 lysine-9 specific 5
3mo5_D2e-2734170132283Histone-lysine N-methyltransferase, H3 lysine-9 specific 5
3sw9_A2e-2734170132283Histone-lysine N-methyltransferase EHMT1
3sw9_B2e-2734170132283Histone-lysine N-methyltransferase EHMT1
3swc_A2e-2734170132283Histone-lysine N-methyltransferase EHMT1
3swc_B2e-2734170132283Histone-lysine N-methyltransferase EHMT1
5v9j_A2e-2734170134285Histone-lysine N-methyltransferase EHMT1
5v9j_B2e-2734170134285Histone-lysine N-methyltransferase EHMT1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011038471.10.0PREDICTED: histone-lysine N-methyltransferase SUVR4 isoform X2
TrEMBLA0A2K1Y1340.0A0A2K1Y134_POPTR; Uncharacterized protein
TrEMBLA0A3N7HKX10.0A0A3N7HKX1_POPTR; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF451222
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G29000.21e-91G2-like family protein