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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | CCG027221.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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| Family | NZZ/SPL | ||||||||
| Protein Properties | Length: 321aa MW: 34981.3 Da PI: 8.7776 | ||||||||
| Description | NZZ/SPL family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NOZZLE | 21 | 5.4e-07 | 31 | 77 | 36 | 83 |
NOZZLE 36 rtetkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkklvv 83
t +r rkp ++ +q ++k+p rgmgva+le +i+e k ++
CCG027221.1 31 TRTTTTTRTRKPTANKCQTRKKQPR-RGMGVAQLENLRIQERWKAITE 77
3336789**********99999995.*************998876633 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Pfam | PF08744 | 8.0E-5 | 31 | 76 | IPR014855 | Plant transcription factor NOZZLE |
| Sequence ? help Back to Top |
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| Protein Sequence Length: 321 aa Download sequence Send to blast |
MATSLSLFLM PSDDRKQEST LAISTKPAEP TRTTTTTRTR KPTANKCQTR KKQPRRGMGV 60 AQLENLRIQE RWKAITETNQ IGSLNLQPTK QMHVFDPFNN NDDDNQMAQS GTTVNHGVPM 120 RNNGVVFNGF LGWDHQGGVV VKRVDEFNAN NNGGFGCQVL VNPYMVGSAP VHQAGAPAPA 180 PAAAAVLEAS KELSSIPKVM QQQKQHEPAR CDLCFKMGGF SARAATSAFY AKYQNHNNNE 240 GVEAMEAHRK GSNAMGRKVI MEYELFPGKN SKSTCFKDME FPTAEASVAV GTGEASCVTT 300 YSDYSASDAS NSIDLSLKLS Y |
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_011002471.1 | 0.0 | PREDICTED: uncharacterized protein LOC105109446 | ||||
| Refseq | XP_011016722.1 | 0.0 | PREDICTED: uncharacterized protein LOC105120239 | ||||
| TrEMBL | A0A2K2CBX4 | 0.0 | A0A2K2CBX4_POPTR; Uncharacterized protein | ||||
| STRING | POPTR_0001s41950.1 | 0.0 | (Populus trichocarpa) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Fabids | OGEF8365 | 17 | 23 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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