PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG027109.2
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family ERF
Protein Properties Length: 281aa    MW: 31620 Da    PI: 9.9985
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG027109.2genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.51.2e-11158199351
          AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                   +GV++  k+ +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  CCG027109.2 158 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 199
                  79**98..47*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510328.597131212IPR001471AP2/ERF domain
PfamPF008477.5E-6157200IPR001471AP2/ERF domain
SMARTSM003801.3E-4157214IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-8158202IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.9E-6160204IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MVSLRRRKLL GLCAGRSSFL TPLPRFFDNG TATLGSAQNG RSVSVHPLPS DDAIQPEEGC  60
MVSIYEFKEK KTILKVGAGS SNVSASSSSK EQRSQPYPDS MGATPPTGSY ALETISIYRL  120
IPFLWMYLMV AIQGLEQPVK RRKRHRRKHV QNQEPCLMRG VYFKNMKWQA AIKVDKKQIH  180
LGTVGSQEEA ARLYDRAAFM CGREPNFELS EEEKQELRKF KWDEFLAITR SAINNKKHKR  240
RIGAGLQKRS ETTLQDGDWD AKDGLNGFSA SEDVEPDSSA S
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011024614.11e-144PREDICTED: ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_011024615.11e-144PREDICTED: ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_011024616.11e-144PREDICTED: ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_011024617.11e-144PREDICTED: ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_011024618.11e-144PREDICTED: ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_011024619.11e-144PREDICTED: ethylene-responsive transcription factor-like protein At4g13040
TrEMBLB9GQL71e-137B9GQL7_POPTR; ERF family protein
STRINGPOPTR_0002s24750.41e-138(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54573253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.15e-49ERF family protein