PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG026922.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family NAC
Protein Properties Length: 192aa    MW: 21621.6 Da    PI: 10.074
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG026922.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM644.4e-20117466128
          NAM  66 kkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  +ky+ g r+nra++sgyWkatg++k ++++ +++++g+kk Lvf kgr pkg k  W+mheyrl
  CCG026922.1  11 RKYPIGARPNRAAASGYWKATGTNKLIINScGTTKIGVKKALVFCKGRPPKGMKIGWIMHEYRL 74 
                  7999***********************99978889***************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.684199IPR003441NAC domain
SuperFamilySSF1019411.06E-211180IPR003441NAC domain
PfamPF023651.7E-91974IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MNGISLRQGI RKYPIGARPN RAAASGYWKA TGTNKLIINS CGTTKIGVKK ALVFCKGRPP  60
KGMKIGWIMH EYRLLDAWNN SKSKGSMRDF PSTERVSSIN FPSTDKSSTS LGNLLNSLKR  120
KHVERDQQRE NCFPRSKKLR TKADMEEEGV LSIGNDGTDE NLCGMPDQSE SSCFSPVQWN  180
PLVQYQEYNH FE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A8e-22117681144NO APICAL MERISTEM PROTEIN
1ut4_B8e-22117681144NO APICAL MERISTEM PROTEIN
1ut7_A8e-22117681144NO APICAL MERISTEM PROTEIN
1ut7_B8e-22117681144NO APICAL MERISTEM PROTEIN
3swm_A8e-22117684147NAC domain-containing protein 19
3swm_B8e-22117684147NAC domain-containing protein 19
3swm_C8e-22117684147NAC domain-containing protein 19
3swm_D8e-22117684147NAC domain-containing protein 19
3swp_A8e-22117684147NAC domain-containing protein 19
3swp_B8e-22117684147NAC domain-containing protein 19
3swp_C8e-22117684147NAC domain-containing protein 19
3swp_D8e-22117684147NAC domain-containing protein 19
4dul_A8e-22117681144NAC domain-containing protein 19
4dul_B8e-22117681144NAC domain-containing protein 19
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024443774.14e-64NAC domain-containing protein 83
TrEMBLA0A3N7G5A91e-63A0A3N7G5A9_POPTR; Uncharacterized protein
STRINGPOPTR_0016s08970.19e-64(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.12e-29NAC-like, activated by AP3/PI