PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CCG026823.1

Organism

Populus euphratica

Taxonomic ID

75702

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus

Family

bZIP

Protein Properties

Length: 266aa MW: 29548.1 Da PI: 6.2261

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CCG026823.1	genome	LZU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.5	4e-10	90	137	4	51
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 +++r + NReA r++R++Kka ++ Lee+vk+L N++L ++++ CCG026823.1 90 NSKAKRPAGNREAVRKYREKKKAHTAYLEEEVKKLRISNQQLVRKIQQ 137 56899*************************************999986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.1E-12	84	153	No hit	No description
SMART	SM00338	1.7E-9	87	154	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.91	89	155	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	2.3E-13	90	137	IPR004827	Basic-leucine zipper domain
CDD	cd14686	1.38E-10	92	145	No hit	No description
SuperFamily	SSF57959	8.75E-8	92	138	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence Send to blast
MKDYNMDDGE IELSDHVLLP NPDSSGILQS SASVDSLLDE FLKNTRTCTH THTCNPLGPD 60 ITHTHTCYHT HTQVITSEED DHVNNREHSN SKAKRPAGNR EAVRKYREKK KAHTAYLEEE 120 VKKLRISNQQ LVRKIQQQVI LEAEVLRLRS ILMGLRGKID TELGVFPFQN QGDATAAFKD 180 GNCGAQSTGG PKNLQCQTDL PCFHTQVVGS SSRVNIDGNG KLMESWEGNC QPVILNCQAN 240 MDNMATTEGH TMDMVEALMS SASQVQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011037808.1	0.0	PREDICTED: uncharacterized protein LOC105134916
Refseq	XP_011037809.1	0.0	PREDICTED: uncharacterized protein LOC105134916
TrEMBL	B9GM57	1e-164	B9GM57_POPTR; Uncharacterized protein
STRING	POPTR_0001s05750.1	1e-164	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2567	32	77

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35040.1	1e-35	bZIP family protein