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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
CCG026276.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
| Family |
NAC |
| Protein Properties |
Length: 316aa MW: 35788.1 Da PI: 7.9555 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| CCG026276.1 | genome | LZU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 176.5 | 7.5e-55 | 5 | 131 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98
lppGfrFhPtdeel+++yL++kv++ +++ +++ +vd++k+ePwdLp k++ +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke+++ g
CCG026276.1 5 LPPGFRFHPTDEELITCYLTRKVSDISFTS-KAVVDVDLNKCEPWDLPGKASMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKTTGKDKEIFR-AGV 100
79*************************999.88***************988999****************************************.999 PP
NAM 99 lvglkktLvfykgrapkgektdWvmheyrle 129
lvg+kktLvfykgrap+gek++Wvmheyrle
CCG026276.1 101 LVGMKKTLVFYKGRAPRGEKSNWVMHEYRLE 131
*****************************85 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 316 aa
Download sequence Send
to blast |
MEESLPPGFR FHPTDEELIT CYLTRKVSDI SFTSKAVVDV DLNKCEPWDL PGKASMGEKE 60
WYFFSLRDRK YPTGLRTNRA TEAGYWKTTG KDKEIFRAGV LVGMKKTLVF YKGRAPRGEK 120
SNWVMHEYRL ENRHPFKSTK EEWVVCRIFQ KSTAVKKPQQ EPSSQQSLGS LCDTNSIVND 180
QYGDIELPNL NRIANSSSGF SNISAHTYNN ESNVNMNLNM NWAAAREAAT LPSLSWPPGL 240
LSSNLTTNSL LLKALQLRSY QQREATTTDY SFLTNGIVHE FGTDLGSNFQ ASSSSKVLDS 300
VPQPQQEQPF NLDSIW
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 9e-58 | 4 | 157 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 9e-58 | 4 | 157 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 9e-58 | 4 | 157 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 9e-58 | 4 | 157 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-57 | 4 | 157 | 19 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 1e-57 | 4 | 157 | 19 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 1e-57 | 4 | 157 | 19 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 1e-57 | 4 | 157 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 1e-57 | 4 | 157 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 1e-57 | 4 | 157 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 1e-57 | 4 | 157 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 1e-57 | 4 | 157 | 19 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 9e-58 | 4 | 157 | 16 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 9e-58 | 4 | 157 | 16 | 171 | NAC domain-containing protein 19 |
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