PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CCG025233.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family | bZIP | ||||||||
Protein Properties | Length: 143aa MW: 16523.8 Da PI: 10.2372 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 27.1 | 8.9e-09 | 25 | 60 | 5 | 40 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 kr +r+++NRe+ArrsR ++++ +e L ++ Le CCG025233.1 25 KRRKRMISNRESARRSRMKRQKHMEDLVTEKSILER 60 9**************************888777765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.2E-7 | 20 | 102 | No hit | No description |
SMART | SM00338 | 2.7E-10 | 21 | 85 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.255 | 23 | 86 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.5E-7 | 25 | 63 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.44E-9 | 25 | 79 | No hit | No description |
CDD | cd14702 | 2.45E-14 | 26 | 76 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 28 | 43 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006521 | Biological Process | regulation of cellular amino acid metabolic process | ||||
GO:0009267 | Biological Process | cellular response to starvation | ||||
GO:0009617 | Biological Process | response to bacterium | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009901 | Biological Process | anther dehiscence | ||||
GO:0010182 | Biological Process | sugar mediated signaling pathway | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0071333 | Biological Process | cellular response to glucose stimulus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence Send to blast |
MPSSFAKAGS SGSEIDPPSA MVDEKRRKRM ISNRESARRS RMKRQKHMED LVTEKSILER 60 KIHEDNEKYA ALRQRHFALE SDNKVLTDEK LKLAEYLKNL QQVLASYNVI ESDQDLKVSD 120 RFLNPWQVHG SVKSITTSGM FKV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 38 | 43 | RSRMKR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011010217.1 | 1e-102 | PREDICTED: basic leucine zipper 1 | ||||
TrEMBL | A0A3G1CGI7 | 2e-94 | A0A3G1CGI7_POPCN; BZIP transcription factor | ||||
TrEMBL | B9HWY9 | 2e-94 | B9HWY9_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0010s15280.1 | 3e-95 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF15536 | 8 | 12 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49450.1 | 2e-24 | basic leucine-zipper 1 |