PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CCG025007.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family | EIL | ||||||||
Protein Properties | Length: 604aa MW: 68606.3 Da PI: 6.0908 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 521.5 | 3.4e-159 | 36 | 413 | 1 | 353 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkek 98 +el++rmw+d+m+lkrlke++k+ ke ++ +k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+gasd+Lr+WWk+k CCG025007.2 36 DELERRMWRDKMRLKRLKEQTKS----KEG-IDIAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDK 128 79*******************98....788.******************************************************************* PP XXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.---- CS EIN3 99 vefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppyk 196 v+fdrngpaai+kyqa+n i+++++++++ ++h+l+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWP+G+e+ww++lgl+kd+g+ppyk CCG025007.2 129 VRFDRNGPAAIAKYQADNSIPGKDEGCNS-IGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPSGNEEWWPQLGLPKDHGPPPYK 225 ***************************88.9******************************************************************* PP -GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX...XXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 197 kphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss...slrkqspkvtlsceqkedvegkkesk 291 kphdlkkawkv+vLtavikhmsp+i++ir+l+rqsk+lqdkm+akes+++l+++nqee+++++++++s s++ +s ++++++++++dveg +++ CCG025007.2 226 KPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEESLARELYPNSCpplSSSGGSGSLVINDSSEYDVEGAEDEP 323 *******************************************************************444466677****************777666 PP .XXXXXXXXXX..............................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS EIN3 292 ikhvqavktta..............................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353 + q++k ++ +++++rkrk ++s+ +++ +++ ++tc+ q+ +s+ +l+f+d+ +++ ++ CCG025007.2 324 NFDLQECKPETlsysnlgmermgerlplrqqpypikgevmtSTDFIRKRK-PSSDINMMVDQK-IYTCEAVQCAHSQIRLGFPDRAARDTHQ 413 699*****999******************************9*******9.667767776675.5************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 3.9E-131 | 36 | 283 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 2.4E-76 | 156 | 293 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 5.23E-62 | 162 | 286 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0001666 | Biological Process | response to hypoxia | ||||
GO:0009873 | Biological Process | ethylene-activated signaling pathway | ||||
GO:0042742 | Biological Process | defense response to bacterium | ||||
GO:0071281 | Biological Process | cellular response to iron ion | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 604 aa Download sequence Send to blast |
MDFFCTPLVE GDVSAPQVEP EVTVEDDYSD EEIDVDELER RMWRDKMRLK RLKEQTKSKE 60 GIDIAKQRQS QEQARRKKMS RAQDGILKYM LKMMEVCKAQ GFVYGIIPEK GKPVTGASDN 120 LREWWKDKVR FDRNGPAAIA KYQADNSIPG KDEGCNSIGP TPHTLQELQD TTLGSLLSAL 180 MQHCDPPQRR FPLEKGVPPP WWPSGNEEWW PQLGLPKDHG PPPYKKPHDL KKAWKVGVLT 240 AVIKHMSPDI AKIRKLVRQS KCLQDKMTAK ESATWLAIIN QEESLARELY PNSCPPLSSS 300 GGSGSLVIND SSEYDVEGAE DEPNFDLQEC KPETLSYSNL GMERMGERLP LRQQPYPIKG 360 EVMTSTDFIR KRKPSSDINM MVDQKIYTCE AVQCAHSQIR LGFPDRAARD THQLNCPYRS 420 TSLEFRGSNF HVNEIKPVIY PQPSAQSKTT APLGNPAPSS FNLSGVPEDG QKMISELMSI 480 YDTNIQGNKN TNRGNNLVTE DHNVFQPKIQ HQQDNHFRGQ SNMINGNIFE ESNINQNHQM 540 FSQEVGQFDR FKPLNSPFET NQNNSGFSLM FGSPFDLSSF DYKDDLQVLG MDTLPKHQDV 600 STWF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 6e-86 | 161 | 293 | 2 | 134 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 6e-86 | 161 | 293 | 2 | 134 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00367 | DAP | Transfer from AT3G20770 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011006497.1 | 0.0 | PREDICTED: protein ETHYLENE INSENSITIVE 3-like | ||||
Refseq | XP_011006504.1 | 0.0 | PREDICTED: protein ETHYLENE INSENSITIVE 3-like | ||||
Swissprot | O24606 | 0.0 | EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3 | ||||
TrEMBL | B9MYS9 | 0.0 | B9MYS9_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0004s20830.1 | 0.0 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF322 | 34 | 200 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20770.1 | 0.0 | EIL family protein |