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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
CCG024950.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
| Family |
C2H2 |
| Protein Properties |
Length: 280aa MW: 30349 Da PI: 4.4293 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| CCG024950.1 | genome | LZU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 11.8 | 0.00072 | 254 | 277 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23
++C+ C +sF + Lk+H + H
CCG024950.1 254 FSCKSCERSFGSDGALKSHSQAkH 277
89*****************76655 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 280 aa
Download sequence Send
to blast |
MSSMEFWGVE VKAGEPLKVE PKDFYMIHLS QAALGESSKK GNESVPLFLK FDEKKLVLGT 60
LSPDKIPQLS FDLVFEREFE LSHNWKNGSV FFCGYQAAIP ENDDSDFSDD GDEIPFEKVE 120
NVKFATGTDK AAKPEKPKAN PVAPSKDDES DEDDSDDDSD EDDSDDGSEG MSIEEDLDDE 180
SDSEDEETPK KAEQSKKRTN DSAIKTPVSS KKAKTATPQK TDGGKAGQVT PHPAKGKAPS 240
NGNNPKTPKS GGNFSCKSCE RSFGSDGALK SHSQAKHGGK
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| Functional Description ? help
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| Source |
Description |
| UniProt | Mediates the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (By similarity). {ECO:0000250}. |
