 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
CCG024598.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
| Family |
C2H2 |
| Protein Properties |
Length: 205aa MW: 22124.7 Da PI: 8.1129 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| CCG024598.1 | genome | LZU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 12.9 | 0.00034 | 23 | 45 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y C+ C++ F++ + L H + H
CCG024598.1 23 YICSLCDREFKSGHALSGHYNAH 45
89*****************9988 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 205 aa
Download sequence Send
to blast |
MVEKDNDTSS DERTVTSKLR SGYICSLCDR EFKSGHALSG HYNAHSKKRK RKYVPGTVGK 60
VIRVLVPSID VEPPVARKHG SEFTHGAPTP GVQSGVDYET GDESSSTRPQ GGLKKNINLN 120
IETHRSHPCE RDVNDEAPRG GGLLNITTLI HGVKINNGVD MDLARTITNP IVKASGKENG 180
DAKFTSGKNG DEDLDLELRL GLGPA
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | GU284306 | 0.0 | GU284306.1 Populus balsamifera isolate FRE01 haplotype A hypothetical protein gene, partial sequence. |
| GenBank | GU284307 | 0.0 | GU284307.1 Populus balsamifera isolate FRE01 haplotype B hypothetical protein gene, partial sequence. |
| GenBank | GU284312 | 0.0 | GU284312.1 Populus balsamifera isolate GIL14 haplotype A hypothetical protein gene, partial sequence. |
| GenBank | GU284314 | 0.0 | GU284314.1 Populus balsamifera isolate KUU07 haplotype A hypothetical protein gene, partial sequence. |
| GenBank | GU284316 | 0.0 | GU284316.1 Populus balsamifera isolate RNA13 haplotype A hypothetical protein gene, partial sequence. |
| GenBank | GU284318 | 0.0 | GU284318.1 Populus balsamifera isolate STO11 haplotype A hypothetical protein gene, partial sequence. |
| GenBank | GU284322 | 0.0 | GU284322.1 Populus balsamifera isolate LOV02 haplotype A hypothetical protein gene, partial sequence. |
