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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
CCG022835.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
| Family |
MYB |
| Protein Properties |
Length: 203aa MW: 23140.2 Da PI: 8.9274 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| CCG022835.1 | genome | LZU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 61 | 2.5e-19 | 18 | 65 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd +l+++v+ +G ++Wkt+a + g++R++k+c++rw +yl
CCG022835.1 18 KGAWTAEEDNKLAHCVEVHGARRWKTVALKSGLNRCGKSCRLRWMNYL 65
79********************************************97 PP
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| 2 | Myb_DNA-binding | 48.7 | 1.8e-15 | 71 | 116 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l
CCG022835.1 71 RGNISCDEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 116
5677779***************.*********.************986 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009957 | Biological Process | epidermal cell fate specification |
| GO:0010090 | Biological Process | trichome morphogenesis |
| GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0048481 | Biological Process | plant ovule development |
| GO:0048629 | Biological Process | trichome patterning |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 203 aa
Download sequence Send
to blast |
MAPKNTVTDA STKKVMSKGA WTAEEDNKLA HCVEVHGARR WKTVALKSGL NRCGKSCRLR 60
WMNYLRPNIK RGNISCDEED LIIRLHKLLG NRWSLIAGRL PGRTDNEIKN YWNSHLSKKI 120
IDQTQKEKMP DQPSTPLATM HQKTSDAIQV EEEGSAREAW NLETGNFDVD EFFDFSAEGS 180
YWVDKSLQLD GDSVAHRSPI VKR
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