PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG022470.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 235aa    MW: 26858.3 Da    PI: 9.9488
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG022470.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.49.5e-11122165548
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                  ++ rr+ +NRe+ArrsR RK++ +e+L++ v  L  eN++L ++
  CCG022470.1 122 RKRRRMVSNRESARRSRMRKQKHVENLRNQVNRLRIENRELTNQ 165
                  5779999********************************99865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.5E-11118196IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.0E-11119166No hitNo description
PROSITE profilePS5021710.783120166IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.87E-11122169No hitNo description
PfamPF001701.6E-8122166IPR004827Basic-leucine zipper domain
CDDcd147021.20E-20123170No hitNo description
PROSITE patternPS000360125140IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
MGPTNTMNSA HKYEPPMMQF FPFLLPLPSP IYLAISIAML STVSAIFPSV EPMASNPFQS  60
FENGFTPWDC FDPFPSSPQS PKPVGSSSGS DKSNQADQNP DNSNSNSGSD DPNPQVSVID  120
ERKRRRMVSN RESARRSRMR KQKHVENLRN QVNRLRIENR ELTNQLRFVL YHSHGVRTDY  180
DRLRSEYSML RKKLSDIRQI LMMRQLQELT SAWPCNNMIT TTTTTEQIAP SLITS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1121125RKRRR
2121142RKRRRMVSNRESARRSRMRKQK
3134141RRSRMRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011007850.11e-174PREDICTED: basic leucine zipper 43-like
TrEMBLA0A3N7HH081e-122A0A3N7HH08_POPTR; Uncharacterized protein
STRINGPOPTR_0007s14740.13e-83(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54353254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.14e-34basic leucine-zipper 5