PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG022275.2
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 210aa    MW: 23789.5 Da    PI: 5.2727
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG022275.2genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.21.3e-112979353
                 XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53
                 +l++ +r+ +NRe+ArrsR +K++ ++ L     +L++eN +  k+++   
  CCG022275.2 29 DLRKRKRMLSNRESARRSRVKKQKHLDDLMGQLGQLSNENNEILKRMNVTC 79
                 58999***********************************87766655444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.0E-92075No hitNo description
SMARTSM003387.7E-142791IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.7262976IPR004827Basic-leucine zipper domain
PfamPF001707.3E-93076IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.61E-113183No hitNo description
CDDcd147025.50E-173283No hitNo description
PROSITE patternPS0003603449IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MASSSGASSG STTMLRNSSS EEDLQQVMDL RKRKRMLSNR ESARRSRVKK QKHLDDLMGQ  60
LGQLSNENNE ILKRMNVTCQ LYMNIEAENS ILRAQMAELS HRLNSLNEII EYVNFCSGTF  120
ERHEDAAAPT TSDFGHQLGD DFFTNPWNNA DFHLNQPIMD LIIGTFGRHE DAAAPATGAF  180
GHQLGDDFSM NPWNNADFHL NQPIMDMIMY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13051RKRKRMLSNRESARRSRVKKQK
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011025867.11e-101PREDICTED: ocs element-binding factor 1-like
SwissprotC0Z2L51e-37BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A2K1ZMX51e-98A0A2K1ZMX5_POPTR; Uncharacterized protein
STRINGPOPTR_0007s13380.19e-98(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61334147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.16e-37basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]