PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG020268.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 324aa    MW: 34909.2 Da    PI: 5.879
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG020268.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_156.36.8e-18131182354
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                  ++kr rr+ +NRe+ArrsR+RK+a +  Le  v+ L++eN +L k+l+   +
  CCG020268.1 131 DIKRIRRMVSNRESARRSRKRKQAHLSDLEIQVDHLTGENASLFKQLSDAAQ 182
                  68***************************************99977665544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.0E-15129207IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.887131183IPR004827Basic-leucine zipper domain
PfamPF001702.5E-15132181IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.74E-13132184No hitNo description
Gene3DG3DSA:1.20.5.1707.8E-14133184No hitNo description
CDDcd147021.49E-20134185No hitNo description
PROSITE patternPS000360136151IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MEEQKAGGSD GMKKSESELA GFSAETYGFF SDILSGDLSS FPVNKTRDIV NGFSTCGGLT  60
ESCFLWSQNT NPKNSSVSVS TDAQSSLRVG SPMSANKPRV KDSQTRVAAS VSSPDQSDED  120
GLSEQSTNPH DIKRIRRMVS NRESARRSRK RKQAHLSDLE IQVDHLTGEN ASLFKQLSDA  180
AQQFRTAETN RCVLNSNVEA LRAKVKLAED MVARGSLTCS NFNQFLQSHL TSPQLLNNHN  240
LHLMPNVSPT ITIQGDEASY AGMSVSGQNS GLGLGISDAN DEKPGENAHE EPVDKQHDQP  300
KANRGSGVES NGGDSMLREG NSGS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1145151RRSRKRK
2145152RRSRKRKQ
3147152SRKRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by glucose. {ECO:0000269|PubMed:18841482}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGU2750603e-55GU275060.1 Populus balsamifera isolate GIL14 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750613e-55GU275061.1 Populus balsamifera isolate GIL14 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750623e-55GU275062.1 Populus balsamifera isolate HAY07 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750633e-55GU275063.1 Populus balsamifera isolate HAY07 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750643e-55GU275064.1 Populus balsamifera isolate INU03 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750653e-55GU275065.1 Populus balsamifera isolate INU03 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750663e-55GU275066.1 Populus balsamifera isolate KUU07 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750673e-55GU275067.1 Populus balsamifera isolate KUU07 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750683e-55GU275068.1 Populus balsamifera isolate LOV02 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750693e-55GU275069.1 Populus balsamifera isolate LOV02 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750703e-55GU275070.1 Populus balsamifera isolate MGR10 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750713e-55GU275071.1 Populus balsamifera isolate MGR10 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750723e-55GU275072.1 Populus balsamifera isolate NWL07 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750733e-55GU275073.1 Populus balsamifera isolate NWL07 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750743e-55GU275074.1 Populus balsamifera isolate POR11 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750753e-55GU275075.1 Populus balsamifera isolate POR11 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750763e-55GU275076.1 Populus balsamifera isolate RNA13 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750773e-55GU275077.1 Populus balsamifera isolate RNA13 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750783e-55GU275078.1 Populus balsamifera isolate WHR03 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750793e-55GU275079.1 Populus balsamifera isolate WHR03 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011006637.10.0PREDICTED: basic leucine zipper 9-like
RefseqXP_011008678.10.0PREDICTED: basic leucine zipper 9
SwissprotQ9FUD32e-65BZIP9_ARATH; Basic leucine zipper 9
TrEMBLU5GEY10.0U5GEY1_POPTR; Uncharacterized protein
STRINGPOPTR_0006s29250.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41953458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.11e-66basic leucine zipper 9
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ortiz-Espín A, et al.
    Mitochondrial AtTrxo1 is transcriptionally regulated by AtbZIP9 and AtAZF2 and affects seed germination under saline conditions.
    J. Exp. Bot., 2017. 68(5): p. 1025-1038
    [PMID:28184497]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  4. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]