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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CCG019352.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family | bZIP | ||||||||
Protein Properties | Length: 186aa MW: 21847.3 Da PI: 10.3874 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 27.4 | 7.1e-09 | 71 | 105 | 3 | 37 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvke 37 ++kr +r ++ R++A+rsR+RK+ ++e+Le+ vk+ CCG019352.1 71 KSKRIKRIMSSRLSAQRSRLRKLVYVEKLERDVKA 105 68*****************************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00170 | 1.9E-7 | 71 | 105 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 6.7E-7 | 73 | 105 | No hit | No description |
SuperFamily | SSF57959 | 5.06E-6 | 73 | 111 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence Send to blast |
MLNSKRSHSA SYFDMEVLAP SLSNRRVDRD LDPRSNGTLG PVIPCSCTVT EQQKDTQCKR 60 RHDNALDSEL KSKRIKRIMS SRLSAQRSRL RKLVYVEKLE RDVKAEEVHD HPRFKYLTKM 120 QVKVYWLSLQ ASLYQPSQMA LKTENTHIKE IMKGLEREKA MKEVDFQYLK KELQTLRGAS 180 MRLLYN |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC216544 | 3e-66 | AC216544.1 Populus trichocarpa clone POP016-D10, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | B9IGE5 | 1e-79 | B9IGE5_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0016s12930.1 | 2e-80 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF28220 | 3 | 3 |