PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CCG019241.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family | bZIP | ||||||||
Protein Properties | Length: 264aa MW: 29790.4 Da PI: 8.4662 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39 | 1.8e-12 | 194 | 238 | 5 | 49 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 +r +rk+kNRe+A rsR+RK+a+ eL kv Le+eN +Lkke CCG019241.1 194 RRLKRKIKNRESAARSRARKQAYHNELVSKVSRLEEENIKLKKEK 238 5889**************************************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.3E-11 | 186 | 237 | No hit | No description |
SMART | SM00338 | 1.3E-9 | 190 | 262 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.657 | 192 | 237 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.75E-10 | 194 | 240 | No hit | No description |
CDD | cd14707 | 6.27E-14 | 194 | 231 | No hit | No description |
Pfam | PF00170 | 4.5E-11 | 194 | 239 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 197 | 212 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 264 aa Download sequence Send to blast |
MASQSNGQQS HMQPCQLMRQ TSWYNLTLNE VENQMGNLGK PLCSMNLDEL LKNVWSTEAN 60 QSMGMDSEST ATSSLQRQAS FTLARALSGK TVDQVWKEIQ EGQKKRFGQE MNVQEREQTL 120 GETTLEDFLV QAGLFAEATI SPSLDLVTVA AGTPQCFPQN MVLSSSPSTG TLSDSTTSGW 180 NRDAPDTLEK SIERRLKRKI KNRESAARSR ARKQAYHNEL VSKVSRLEEE NIKLKKEKEF 240 EKKFPIEPSP EQKYQLRRTS SATF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC184074 | 0.0 | AC184074.2 Populus trichocarpa clone Pop1-51H15, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011006043.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Refseq | XP_011006044.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Swissprot | Q9LES3 | 1e-66 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | B9GI21 | 1e-174 | B9GI21_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0001s22790.1 | 1e-175 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF12464 | 25 | 32 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56850.1 | 1e-50 | ABA-responsive element binding protein 3 |
Publications ? help Back to Top | |||
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