PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Function |

Orthologous Group |

Publication

Basic Information? help Back to Top

TF ID

CCG019241.1

Organism

Populus euphratica

Taxonomic ID

75702

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus

Family

bZIP

Protein Properties

Length: 264aa MW: 29790.4 Da PI: 8.4662

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CCG019241.1	genome	LZU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	39	1.8e-12	194	238	5	49
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 +r +rk+kNRe+A rsR+RK+a+ eL kv Le+eN +Lkke CCG019241.1 194 RRLKRKIKNRESAARSRARKQAYHNELVSKVSRLEEENIKLKKEK 238 5889**************************************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.3E-11	186	237	No hit	No description
SMART	SM00338	1.3E-9	190	262	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.657	192	237	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.75E-10	194	240	No hit	No description
CDD	cd14707	6.27E-14	194	231	No hit	No description
Pfam	PF00170	4.5E-11	194	239	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	197	212	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence Send to blast
MASQSNGQQS HMQPCQLMRQ TSWYNLTLNE VENQMGNLGK PLCSMNLDEL LKNVWSTEAN 60 QSMGMDSEST ATSSLQRQAS FTLARALSGK TVDQVWKEIQ EGQKKRFGQE MNVQEREQTL 120 GETTLEDFLV QAGLFAEATI SPSLDLVTVA AGTPQCFPQN MVLSSSPSTG TLSDSTTSGW 180 NRDAPDTLEK SIERRLKRKI KNRESAARSR ARKQAYHNEL VSKVSRLEEE NIKLKKEKEF 240 EKKFPIEPSP EQKYQLRRTS SATF

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AC184074	0.0	AC184074.2 Populus trichocarpa clone Pop1-51H15, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011006043.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_011006044.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	1e-66	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	B9GI21	1e-174	B9GI21_POPTR; Uncharacterized protein
STRING	POPTR_0001s22790.1	1e-175	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF12464	25	32

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	1e-50	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]