PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG018612.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bHLH
Protein Properties Length: 224aa    MW: 24082 Da    PI: 9.4669
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG018612.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.91.3e-06194217629
                  HHHHHHHHHHHHHHHHHHHCTSCC CS
          HLH   6 nerErrRRdriNsafeeLrellPk 29 
                  +++Er RR ri +++ +L+el+P+
  CCG018612.1 194 SIAERVRRTRISDRIRKLQELVPN 217
                  689********************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.362188224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.8E-6191220IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.58E-4192222No hitNo description
Gene3DG3DSA:4.10.280.103.1E-5193220IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    Send to blast
MHQAPAASGN TSGGGGGGGG GGGLPRLRSA PATWLLALLE EEEEDPLKQN QNLTQLLTSN  60
APSSRNSAPF NASSAAVEPG LFETGGVFRR QNSSPADFIG NSGIGSDQGY FSNYGISSNY  120
EYMPPNMEVS PSGKRAREIE LRNPSARYPP PLKGAQTGPL RASSLIEMEM DKLLEESVPC  180
KIRAKRGCAT HPRSIAERVR RTRISDRIRK LQELVPNMDK VTPF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011001080.11e-160PREDICTED: transcription factor bHLH80-like isoform X1
SwissprotQ9C8P81e-62BH080_ARATH; Transcription factor bHLH80
TrEMBLA0A2K1Y4131e-124A0A2K1Y413_POPTR; Uncharacterized protein
STRINGPOPTR_0019s10900.11e-117(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF91323043
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.17e-48bHLH family protein