PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG017682.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 324aa    MW: 36267.3 Da    PI: 9.6988
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG017682.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.64.9e-12133191563
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  k+ +r ++NR++A++sR++++++++  e+kvk+Le+e   L  ++  ++ + ++lk+e 
  CCG017682.1 133 KKLKRVISNRVSAQKSRLKRLQYLADTERKVKALEEEIAVLSPRVALYRSHHQALKMEQ 191
                  899****************************************************9985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.1E-11126188No hitNo description
SMARTSM003381.3E-11129193IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.427131194IPR004827Basic-leucine zipper domain
PfamPF001702.3E-10133191IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.27E-9133188No hitNo description
CDDcd147032.68E-16134185No hitNo description
PROSITE patternPS000360136151IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MEAMKRSSSP GLPPWPKRAL ELTSFSAMPQ SVHALARSSF QGLKKPYSMD SSVTKSPFNP  60
SDAMIISSSS ADTNNKESQN LSFPFDNKNS TTKDIATDPA IPSSGDKPVK TRAMISGVQI  120
RAARAIDPNM DPKKLKRVIS NRVSAQKSRL KRLQYLADTE RKVKALEEEI AVLSPRVALY  180
RSHHQALKME QKMLNMEMSA QTSNKMLKDA EIEDNKAEVS RLRQLHLTQQ EVMLAGWENG  240
FDQQMAVNTN MFQLSSERMA YITSIQDGWR CVLGWDPSEQ EMASPSLPQF GSSIVLNMNP  300
QLGGIEQMMT FNSMPTNQDP DKYN
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2103420.0AC210342.1 Populus trichocarpa clone POP091-B06, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLB9HNC11e-141B9HNC1_POPTR; Uncharacterized protein
STRINGPOPTR_0009s07880.11e-142(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF148181113
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.22e-21bZIP family protein