PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG017248.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 597aa    MW: 65062.6 Da    PI: 8.2444
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG017248.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.95.9e-10427484562
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                  kr++r   NR +A rs +RK  +i eLe kv++L++e ++L  +l  l+  +  l+++
  CCG017248.1 427 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQ 484
                  9********************************************9998877666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.0E-18423487IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.737425488IPR004827Basic-leucine zipper domain
PfamPF001709.3E-9427481IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.66E-11427478No hitNo description
Gene3DG3DSA:1.20.5.1701.8E-10427483No hitNo description
CDDcd147037.85E-24428477No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 597 aa     Download sequence    Send to blast
MGDTEDANSE MIHRLQSSFG TTQSSSATMS KQPFSLINQL DVSQLNLNQT QLRARHFANF  60
YQNFSGDSNK RVGIPPSHPN QIPPISPYSQ IPVSRPANQQ MSNQNLSMGP THSRSLSQPS  120
SFFCLDSLPP LSPAPFRDSS SPTVSDPIST DVSMEDKDGS SHSLLPPSPF NRGNAPRVGE  180
SLPPRKAHRR SNSDIPFGNV LQCSPPLIPS RGSGGLERSL SGRENPAMAK PAQLVKKEWE  240
RGGESIAEGT GERKSEGDVD DLFSAYMNLD NIDALNSSGT DEKNGNENRE DLDSRASGTK  300
TNGGDSSDNE AESSVNESGG SVPRGGFSSS TEKREGIKRS AGGDIAPTSR HYRSVSMDSF  360
MGKLNFGDES PKLPPSPGTR PGQRSPTNSM DGNAFSLEFG NGEFSGAELK KIMANEKLAE  420
IASTDPKRAK RILANRQSAA RSKERKMRYI SELEHKVQTL QTEATTLSAQ LTLLQRDSVG  480
LTNQNNELKF RLQAMEQQAQ LRDALNEALN GEVRRLKIAT AERGGDSDPS KGLVQQQLSV  540
NPQMFLQQPR PSQLNRRQLQ QSSASQINMH QLQQQPQSSQ QQPQQNGSTT LKSDSNQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011047123.10.0PREDICTED: transcription factor RF2a
RefseqXP_011047131.10.0PREDICTED: transcription factor RF2a
TrEMBLB9HRE70.0B9HRE7_POPTR; Uncharacterized protein
STRINGPOPTR_0009s12830.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22723484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-165bZIP family protein