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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
CCG016667.2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
GATA |
Protein Properties |
Length: 358aa MW: 39338.3 Da PI: 6.5969 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
CCG016667.2 | genome | LZU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 55 | 1.1e-17 | 258 | 291 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
C +C tkTp+WR gp g+ktLCnaCG++y++ +
CCG016667.2 258 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 291
99*****************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 358 aa
Download sequence Send
to blast |
MIGQTNTTSN FMDEIDCGSF FEHIDDLLEF PSDDVDATLP DCTTTNNHTS CFVNNDDNSF 60 PGIWPTQSDS LPGSASDLSA ELSVPYEDIV QLEWLSNFVE DSFSGGSLTM KKEESTIVNN 120 KDSPPHHQYQ FQTSSPVSVL ESSSSCSGEK TAPRSPEVGA SGKRGRPRSK RPRPATFTPR 180 PAMQLISPTS SITEVPQPFD PSKIALDSEN FAESRLVIKI PNHVDPEHKK KKKIKFTVPL 240 GPVEMNQNPS PQQAVRKCMH CEITKTPQWR AGPMGPKTLC NACGVRYKSG RLFPEYRPAA 300 SPTFVPSLHS NSHKKVVEMR AKAGEKITVS RPAAMVANSP ELIPNKSNPA MDYIEGMV
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB970779 | 0.0 | AB970779.1 Populus nigra PniGATA8b mRNA for GATA type zinc finger domain, complete cds. |