PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CCG014586.1

Organism

Populus euphratica

Taxonomic ID

75702

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus

Family

bZIP

Protein Properties

Length: 315aa MW: 35540.3 Da PI: 8.2013

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CCG014586.1	genome	LZU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	52.8	8.8e-17	247	297	5	56
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN +L+ +l el+++ CCG014586.1 247 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENGRLR-KLRELENML 297 79****************************************.999999985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.1E-13	239	294	No hit	No description
SMART	SM00338	7.1E-13	243	309	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.277	245	289	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.5E-11	247	291	No hit	No description
CDD	cd14707	3.98E-22	247	293	No hit	No description
Pfam	PF00170	8.7E-13	247	290	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	250	265	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009737	Biological Process	response to abscisic acid
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence Send to blast
MGSQGDGSSH HVQSQFQPLV RQNSMYSLTL DEVQNQLGDL GKPLSSMNLD ELLKNVWTVE 60 AAQTTALEVE GTPLANQTAL QRQASLSLTS ALSKKTVDEV WKDIQQSKRD EEMKSKERQP 120 TFGEMTLEDF LVKAGVVAEA SVDKKDDGGS VVLVDTNAAQ QFLQQSQWVQ CPPQPQYQHP 180 QQSMVEVYMP GQPMPQPLHM GSGSMMDVSY PKNQVPLPPP LMGTLSDTQT LARKRAVPNM 240 FEKTVERRQK RMIKNRESAA RSRARKQAYT NELENKVSRL EEENGRLRKL RELENMLPCI 300 PEPKYQLRRT TSAPF

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00409	DAP	Transfer from AT3G56850	Download

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AC210341	0.0	AC210341.1 Populus trichocarpa clone POP085-M05, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011046490.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	1e-86	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	B9HVF2	0.0	B9HVF2_POPTR; Uncharacterized protein
STRING	POPTR_0010s25440.1	0.0	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1320	34	105

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	7e-81	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]