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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
CCG012953.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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| Family |
MYB |
| Protein Properties |
Length: 294aa MW: 33589.4 Da PI: 5.0249 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| CCG012953.1 | genome | LZU | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 51.7 | 2e-16 | 24 | 71 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT eEd ll++++ +G g+W++ ar+ g++Rt+k+c++rw++yl
CCG012953.1 24 KGPWTIEEDSLLAHYISIHGEGHWNSAARCAGLKRTGKSCRLRWLNYL 71
79********************************************97 PP
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| 2 | Myb_DNA-binding | 46.8 | 6.8e-15 | 77 | 120 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+ T E++l+++++ ++G++ W++Ia++++ gRt++++k++w++
CCG012953.1 77 RGNITLKEQLLILQLHSRWGNR-WSKIAQMLP-GRTDNEIKNYWRT 120
78999*****************.*********.***********96 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009414 | Biological Process | response to water deprivation |
| GO:0009651 | Biological Process | response to salt stress |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0009751 | Biological Process | response to salicylic acid |
| GO:0016036 | Biological Process | cellular response to phosphate starvation |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0046686 | Biological Process | response to cadmium ion |
| GO:0005634 | Cellular Component | nucleus |
| GO:0001046 | Molecular Function | core promoter sequence-specific DNA binding |
| GO:0005516 | Molecular Function | calmodulin binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 294 aa
Download sequence Send
to blast |
MDAQARKHGY AGTQSEDQGM SIRKGPWTIE EDSLLAHYIS IHGEGHWNSA ARCAGLKRTG 60
KSCRLRWLNY LRPNVRRGNI TLKEQLLILQ LHSRWGNRWS KIAQMLPGRT DNEIKNYWRT 120
RVQKQAKQLK CDVNSKQFRD TMRYVWIPQL IEKIGAESES PMDQPTISPP TYYSSQIDIP 180
VTASESGSDL IDPDFMPDIS VSSTFSDSLD AQVSPWSDLT DYQNPPCGQY YSDSMQNGSS 240
LCPENDSSSW SWCQDGVDMQ GVEQERYGFI GGGDSLDQSL WNEENIWFLQ QQLM
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