PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG012893.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 99aa    MW: 11421 Da    PI: 10.1058
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG012893.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.14.3e-0913641358
                 HHHHHHHHHHHHHHHHHHHHHHHHHHH......HHHHHHHHHHHHHHHHHHH CS
       bZIP_1 13 NReAArrsRqRKkaeieeLeekvkeLe......aeNkaLkkeleelkkevak 58
                 NR +ArrsR RK+++i eLe+ v +L+      a  +aLk e+e+l++ + +
  CCG012893.1 13 NRQSARRSRVRKLQYISELERYVTSLQlirtnaAHQEALKREIERLRQVYHQ 64
                 ************************9964444446667899999998886643 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0041464IPR004827Basic-leucine zipper domain
CDDcd147031.04E-10960No hitNo description
SuperFamilySSF579591.41E-61043No hitNo description
Gene3DG3DSA:1.20.5.1701.2E-91264No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    Send to blast
MINLGPICTI LANRQSARRS RVRKLQYISE LERYVTSLQL IRTNAAHQEA LKREIERLRQ  60
VYHQQNLKME NTSPPSASST PSNDPTTPTT DIEQQLFQV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11723RRSRVRK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024446890.15e-31basic leucine zipper 61
TrEMBLA0A2K1WRW41e-29A0A2K1WRW4_POPTR; Uncharacterized protein
STRINGPOPTR_0019s12170.11e-30(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.12e-18bZIP family protein