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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CCG012756.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family | NAC | ||||||||
Protein Properties | Length: 76aa MW: 8847.97 Da PI: 4.2096 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 33.4 | 1.3e-10 | 12 | 60 | 2 | 51 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpkkv 51 ppG+ F Ptd el ++yL +kv+g +l+ +ik++++y ++ePw++ +++ CCG012756.1 12 PPGYSFCPTDVELACFYLYRKVNGLQLPD--TIKDCNLYgDHEPWEIWEAF 60 89************************877..7*****994579***96433 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.97E-11 | 6 | 61 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 11.098 | 11 | 76 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.0E-6 | 12 | 60 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 76 aa Download sequence Send to blast |
MQGEHVSSIE PPPGYSFCPT DVELACFYLY RKVNGLQLPD TIKDCNLYGD HEPWEIWEAF 60 EGSEFLTRRV FSFLLN |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002313991.2 | 5e-38 | NAC domain-containing protein 71 | ||||
TrEMBL | A0A2K1Z479 | 1e-36 | A0A2K1Z479_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0009s07640.1 | 6e-37 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF557 | 24 | 133 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62380.1 | 6e-09 | NAC-domain protein 101 |