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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
CCG011646.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
GATA |
Protein Properties |
Length: 380aa MW: 42031 Da PI: 6.4616 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
CCG011646.1 | genome | LZU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 55 | 1.1e-17 | 269 | 303 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C +C t kTp+WR gp g+ktLCnaCG++y++ +l
CCG011646.1 269 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 303
99*****************************9885 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 380 aa
Download sequence Send
to blast |
MEAPEFYGAS GFFSSQFTSN EKQHSLDSNN KSIGGGDHFI VEDLLDFSNE DDDAMITDPN 60 NNNTFVTATT NSTDSSTVTV VDSCNSSSFS GREPSSFNGD IGSHYTNNFS HHDVHLGSEL 120 CVPYDDLAEL EWLSNFVEES FSSEDLQRLQ LISGMKAPPD ESSKSRHFQT HGDTDDNNNG 180 DVSNISNINN TTFNPETAVP AKARSKRSRA APCNWASRLL VLSPTTSSSD TEIIAGPTPH 240 PNSGKKTIKV EARQKKRDGG VEGCDGRKCL HCATDKTPQW RTGPMGPKTL CNACGVRYKS 300 GRLVPEYRPA ASPTFVLTKH SNSHRKVLEL RRQKEMVRAQ QQHQHQQFLH HHQNMVFGVS 360 NGGDDYLSHQ HVGPDFRQMI
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes (By similarity). Transcription activator involved in xylem formation. Functions upstream of NAC030/VND7, a master switch of xylem vessel differentiation (PubMed:25265867). {ECO:0000250|UniProtKB:Q8LAU9, ECO:0000269|PubMed:25265867}. |