PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG011432.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 319aa    MW: 35092.5 Da    PI: 5.3941
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG011432.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1444.7e-14237293359
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                  + +r+rr++kNRe+A rsR+RK+a++ eLe  +  Le+eN++L ke ee +ke  k 
  CCG011432.1 237 AQQRQRRMIKNRESAARSRERKQAYQVELESLAVRLEEENEQLLKEKEERTKERFKQ 293
                  679****************************************99998888776554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.3E-12232296No hitNo description
SMARTSM003381.2E-11235299IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.978237289IPR004827Basic-leucine zipper domain
PfamPF001708.2E-13237296IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.7E-9239290No hitNo description
CDDcd147075.45E-18239285No hitNo description
PROSITE patternPS000360242257IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MASSKVMASS KPRNSDLSST TSSRSRRAIS SSLSATTTTE KLAHQSTDQL FQRESTMTVD  60
GILRNVYASP STESTLLGAQ ITLMETPNPP PPPPIETNGT DNQDMSDVIP QETKTADDIW  120
REIVAGRKEM KDEPDEMMTL EDFLAKAGAV DVVGEDGDDV KMPQPERMSG GLYAFDPVPP  180
SAFQVLDKVE GSIVGFGNGV EVELVAGSGG GGGGGGGGGG RGKRGRTVVM EPLDKAAQQR  240
QRRMIKNRES AARSRERKQA YQVELESLAV RLEEENEQLL KEKEERTKER FKQLMENVIP  300
IVEKRRPRRM LRRVNSLQW
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011044231.10.0PREDICTED: G-box-binding factor 4-like
SwissprotP427778e-57GBF4_ARATH; G-box-binding factor 4
TrEMBLB9H7S81e-177B9H7S8_POPTR; Uncharacterized protein
STRINGPOPTR_0005s21500.11e-178(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.16e-50bZIP family protein