PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG010882.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family NAC
Protein Properties Length: 333aa    MW: 38470.2 Da    PI: 7.7611
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG010882.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM143.11.6e-4471362127
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 
                  p+G+ FhP+deelv++yL+ k++g   ++ + i+e++++++ePw Lp+  ++++ ++ e+yfF++r+ kya+++r+nr+t++gyWk tgkd+ v++k 
  CCG010882.1   7 PVGYGFHPNDEELVTYYLRLKMHGGYEQEVRLIAEANVCDYEPWVLPElsAIQEpNDPECYFFCPRSYKYANSHRANRTTQAGYWKVTGKDRIVKTKt 104
                  79***********************9888899**************953444443555************************************9987 PP

          NAM  96 kgelvglkktLvfykgrapkgektdWvmheyr 127
                  ++e++g+kktLvfy+gr p+g kt+W+mhey+
  CCG010882.1 105 TKEHIGTKKTLVFYTGRVPNGIKTNWIMHEYH 136
                  7888***************************8 PP

2NAM93.34e-2916924850127
          NAM  50 kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                  ++k+ ++ e+yfF++r+ ky++++r+nr+t++gyWk tgkd++v++k ++e++ +kktLvfy+gr p+g kt+Wvmhey+
  CCG010882.1 169 AIKEpNDPECYFFCPRSYKYPNSHRANRTTQAGYWKVTGKDRAVKAKtTKEHIATKKTLVFYEGRVPNGIKTNWVMHEYH 248
                  33333566*************************************9977888***************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.59E-495154IPR003441NAC domain
PROSITE profilePS5100547.726155IPR003441NAC domain
PfamPF023652.3E-257136IPR003441NAC domain
PfamPF023656.7E-15142248IPR003441NAC domain
PROSITE profilePS5100524.674155267IPR003441NAC domain
SuperFamilySSF1019412.09E-31171266IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MNSRPPPVGY GFHPNDEELV TYYLRLKMHG GYEQEVRLIA EANVCDYEPW VLPELSAIQE  60
PNDPECYFFC PRSYKYANSH RANRTTQAGY WKVTGKDRIV KTKTTKEHIG TKKTLVFYTG  120
RVPNGIKTNW IMHEYHPTFS FPNQREFVLC KLKKDPDAMM PTYKEELSAI KEPNDPECYF  180
FCPRSYKYPN SHRANRTTQA GYWKVTGKDR AVKAKTTKEH IATKKTLVFY EGRVPNGIKT  240
NWVMHEYHPT FTFNNQREFV LCKLKKDPDA IMPTYEEGEA SFNVTSDHTE NQNSTEYNHP  300
QAFQEGEDGA WTASNFTNNE PEVSSSAACI GCG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-35726618164NO APICAL MERISTEM PROTEIN
1ut4_B2e-35726618164NO APICAL MERISTEM PROTEIN
1ut7_A2e-35726618164NO APICAL MERISTEM PROTEIN
1ut7_B2e-35726618164NO APICAL MERISTEM PROTEIN
3swm_A2e-35726621167NAC domain-containing protein 19
3swm_B2e-35726621167NAC domain-containing protein 19
3swm_C2e-35726621167NAC domain-containing protein 19
3swm_D2e-35726621167NAC domain-containing protein 19
3swp_A2e-35726621167NAC domain-containing protein 19
3swp_B2e-35726621167NAC domain-containing protein 19
3swp_C2e-35726621167NAC domain-containing protein 19
3swp_D2e-35726621167NAC domain-containing protein 19
4dul_A2e-35726618164NAC domain-containing protein 19
4dul_B2e-35726618164NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (PubMed:18443413, PubMed:24329768). Calmodulin-regulated transcriptional repressor. Binds several synthetic promoters with randomly selected binding sites (PubMed:17947243). Functions synergistically with SNI1 as negative regulator of pathogen-induced PR1 expression and basal resistance to a virulent strain of P.syringae. Binds directly to the promoter of the PR1 gene (PubMed:22826500). Acts as positive regulator of innate immunity. Involved in the effector-triggered immunity (ETI) induction of immunity-related gene expression (PubMed:24329768). Mediates osmotic stress signaling in leaf senescence by up-regulating senescence-associated genes (PubMed:18443413). {ECO:0000269|PubMed:17947243, ECO:0000269|PubMed:18443413, ECO:0000269|PubMed:22826500, ECO:0000269|PubMed:24329768}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024440064.11e-113protein NTM1-like 9 isoform X5
SwissprotF4JN353e-52NTL9_ARATH; Protein NTM1-like 9
TrEMBLA0A3N7G1571e-111A0A3N7G157_POPTR; Uncharacterized protein
STRINGPOPTR_0014s10350.11e-113(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20652586
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.11e-54NAC transcription factor-like 9
Publications ? help Back to Top
  1. Zheng XY, et al.
    Spatial and temporal regulation of biosynthesis of the plant immune signal salicylic acid.
    Proc. Natl. Acad. Sci. U.S.A., 2015. 112(30): p. 9166-73
    [PMID:26139525]
  2. Guo T, et al.
    Lamin-like Proteins Negatively Regulate Plant Immunity through NAC WITH TRANSMEMBRANE MOTIF1-LIKE9 and NONEXPRESSOR OF PR GENES1 in Arabidopsis thaliana.
    Mol Plant, 2017. 10(10): p. 1334-1348
    [PMID:28943325]