PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG010869.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bHLH
Protein Properties Length: 340aa    MW: 38333.3 Da    PI: 6.5114
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG010869.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.91.4e-11148199155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +r++h ++Er+RR+ +N+ ++ Lr+l+ ++   + +K + a+i   A++++k+L+
  CCG010869.1 148 QRMNHIAVERNRRRLMNDHLNSLRSLMTPS---YIQKGDQASIIGGAIDFVKELE 199
                  79****************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.67E-15140212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.07E-11146203No hitNo description
PROSITE profilePS5088814.513147198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.2E-13148214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.8E-9148199IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-8153204IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MPYLQMLQTV ETPPFFPYKE PSFQTLLKLQ HLQKPWNTNT FYMPETDTQV QPLELESCVT  60
HDIVDLHSPV KSETKEHPNP HSNSCLEGVS PEPTEPNSDS SIPWRAQPQT VPNITTHFSE  120
SSTIIITRER RKRKRTRATK NKEEVESQRM NHIAVERNRR RLMNDHLNSL RSLMTPSYIQ  180
KGDQASIIGG AIDFVKELEQ LVQSLEAHKQ KREIETASTT GISSNQYSTS QPQCDILVEG  240
GTCEEERTVK KKSEATEIEV AAVQNHVNLK IKCPRIPGQL LRAIVALEDL GLTVLHLNIT  300
SSQATVLYSF NLKLEDDCKL GSTDEVAAAA HQIIFSSING
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1129134RRKRKR
2148159RMNHIAVERNRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011039383.10.0PREDICTED: transcription factor bHLH70-like isoform X2
TrEMBLA0A2K1XTK00.0A0A2K1XTK0_POPTR; Uncharacterized protein
STRINGPOPTR_0014s10190.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68943449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46810.19e-77bHLH family protein