PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG010155.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 162aa    MW: 18368.6 Da    PI: 6.5256
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG010155.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.37.1e-132989363
                 XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                 +l++ +r+++NRe+ArrsR RK++ +e L+    +L  eN +   +++ +++++ + ++e+
  CCG010155.1 29 DLRKRKRMISNRESARRSRMRKQKHLEDLTGQLGQLARENNEILTRMNAISQLYMNIEAEN 89
                 58999************************************99999999999998887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.2E-152791IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.3E-92879No hitNo description
PROSITE profilePS5021710.3582992IPR004827Basic-leucine zipper domain
PfamPF001703.7E-103087IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.84E-123183No hitNo description
CDDcd147022.75E-173283No hitNo description
PROSITE patternPS0003603449IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    Send to blast
MASSSGASSG SKAMLRNSSS EEDPRQIMDL RKRKRMISNR ESARRSRMRK QKHLEDLTGQ  60
LGQLARENNE ILTRMNAISQ LYMNIEAENS ILRAQMAELS HRLDSLNEII EYANFSDGLF  120
EPEDAVASVS ATSHQIGDGF FMNPWNNANS HVNQPIMDMV MY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13051RKRKRMISNRESARRSRMRKQK
24350RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011028519.11e-116PREDICTED: ocs element-binding factor 1-like
SwissprotC0Z2L53e-37BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A2K2AFJ81e-102A0A2K2AFJ8_POPTR; Uncharacterized protein
STRINGPOPTR_0005s12130.11e-101(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61334147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18160.18e-39basic leucine-zipper 2
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]