PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG008747.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 314aa    MW: 34554.4 Da    PI: 4.668
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG008747.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.66.5e-14230282355
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                  + +r+rr++kNRe+A rsR+RK+a++ eLe  +  Le+eN++L ke ee +ke
  CCG008747.1 230 AQQRQRRMIKNRESAARSRERKQAYQVELESLAVRLEEENEQLLKEKEERTKE 282
                  679*****************************************999887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.3E-12225285No hitNo description
SMARTSM003387.4E-11228292IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.978230282IPR004827Basic-leucine zipper domain
PfamPF001701.3E-12230283IPR004827Basic-leucine zipper domain
CDDcd147078.89E-19232278No hitNo description
SuperFamilySSF579591.0E-9232284No hitNo description
PROSITE patternPS000360235250IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MASSKVMASS KPRNSDPSST TSSRSRRASS SSSATNSTAK PAYQSTDRLF QKESTMTVDG  60
ILRSVYASPS TESTLLDAQV TLMESPDHLP HPQIETDETD DQDMSDVIPQ ENKTADDIWR  120
EIVVGRKEMK DEPDEMMTLE DFLAKAGAVD VVGEDGNEVK MPPPERLSGG LYAFDPLPPS  180
SFQVLDKEEG SIVGFGNGVE VELVAGSGGG GGGRGKRGRG VAMEPLDKAA QQRQRRMIKN  240
RESAARSRER KQAYQVELES LAVRLEEENE QLLKEKEERT KERFKQVLIL FLDYFSSDTL  300
KTSNPGITLN DVSK
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011042861.10.0PREDICTED: G-box-binding factor 4-like
SwissprotP427779e-49GBF4_ARATH; G-box-binding factor 4
TrEMBLU5GP201e-162U5GP20_POPTR; Uncharacterized protein
STRINGPOPTR_0002s06800.11e-163(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.11e-45bZIP family protein