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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
CCG008427.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
bZIP |
Protein Properties |
Length: 463aa MW: 51175.2 Da PI: 7.7599 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
CCG008427.1 | genome | LZU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 31.6 | 3.5e-10 | 178 | 218 | 5 | 45 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
k rr+++NReAAr+sR+RKka++++Le +L++ ++L
CCG008427.1 178 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 218
788*************************9777777666555 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 463 aa
Download sequence Send
to blast |
MGSRTHNNNK AVTEMPSFVP QISTSNPIGT EGNNIRSSRV SDFSTIEQSL GFRIEDAVDL 60 SRNPLFHQLK SSGQAIGTDV QFGTLNKPLA SSDINLSAAV VGSQSLPLQK EVQVNPVYIP 120 GNHPENWGET SMAEASPRTD TSTDDTDDKN RRFERGQSTA IVASDSSDKS KEKAGDQKTL 180 RRLAQNREAA RKSRLRKKAY VQQLESSRLK LTQLEQELQR ARQQGIFISS SGDQTHSMSG 240 NGALAFDAEY SRWLEEQNRH ISELRAAVNS HAGDAELRTI VDNVVAHFNE VYRLKGTAAK 300 ADVFHILSGM WKTPAERCFM WIGGFRSSEL LKLLMNQLEP LTEQQQMGIC NLQQSSQQAE 360 DALSQGMEAL QQSLAETLAN GNPGSSGSSG NVANYMGQMA MAMGKLGTLE GFLRQADNLR 420 QQTLEQMHRI LTTRQSARAL LAINDYFSRL RALSSLWLAR PQE
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EF195120 | 0.0 | EF195120.1 Populus tremula x Populus alba TGA transcription factor 2 mRNA, complete cds. |