PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG006121.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 197aa    MW: 22609.3 Da    PI: 10.1755
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG006121.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.97e-1184128549
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                  ++ rr+ +NRe+ArrsR RK++ +e+L++ v  L  eN++L ++l
  CCG006121.1  84 RKRRRMVSNRESARRSRMRKQKHVENLRNQVNRLRIENRELTNQL 128
                  5779999********************************998654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.5E-1180158IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.3E-1181128No hitNo description
PROSITE profilePS5021710.78382128IPR004827Basic-leucine zipper domain
PfamPF001701.2E-884128IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.87E-1184131No hitNo description
CDDcd147025.27E-1985132No hitNo description
PROSITE patternPS00036087102IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MLSTVSAIFP SVEPMASNPF QSFENGFTPW DCFDPFPSSP QSPKPVGSSS GSDKSNQADQ  60
NPDNSNSNSG SDDPNPQVSV IDERKRRRMV SNRESARRSR MRKQKHVENL RNQVNRLRIE  120
NRELTNQLRF VLYHSHGVRT DYDRLRSEYS MLRKKLSDIR QILMMRQLQE LTSAWPCNNM  180
ITTTTTTEQI APSLITS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18387RKRRR
283104RKRRRMVSNRESARRSRMRKQK
396103RRSRMRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011041724.11e-144PREDICTED: basic leucine zipper 43-like
TrEMBLA0A3N7HH081e-122A0A3N7HH08_POPTR; Uncharacterized protein
STRINGPOPTR_0007s14740.14e-84(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54353254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.11e-34basic leucine-zipper 5