PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG005202.2
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 415aa    MW: 46762.8 Da    PI: 8.7752
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG005202.2genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_121.16.8e-072853311763
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  A+rsR RK+++i+eLe+ v++L+a+ ++   ele  +++   l +e+
  CCG005202.2 285 AQRSRVRKLQYIAELERNVQALQAKGSEVSAELEFVNQQNLILSMEN 331
                  99**************************9999999888877777666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0088277333IPR004827Basic-leucine zipper domain
CDDcd147032.10E-14282324No hitNo description
SuperFamilySSF579592.18E-5282327No hitNo description
Gene3DG3DSA:1.20.5.1701.0E-4285327No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    Send to blast
MYSGKHALLP PKSPFPIVSP SYVDYVPSSS IGSKTVQKPR EGNTHHQRTS SEMLFIEDQP  60
SWLDDLLNEP ETPVRRGGHR RSSSDSFAYI DAANASNMDY AAQDGCRYKN VISITSWGSQ  120
DFDYYKDVRR TPLYAEMNMS KQKNRAWDSS LNAQTYPSSL SSPRENAGLQ GSGSSCAPRE  180
ADSVSESEKQ DPLDGSHDSK ISSEKDSSNS KSSASETDTK RAKQSCNILE VENPTTTPRW  240
MQNNDMSERP KGKGDGQAAG ADIIRHFKGA RIATYNMKDM QRQFAQRSRV RKLQYIAELE  300
RNVQALQAKG SEVSAELEFV NQQNLILSME NKTLKQRFEN LAHEQLIKCL EHEVLEREIG  360
RLRALYQQQQ QPQHQPASNH RRSKSKDLDS QFANLSLKHK DANSSRDPVT GSLRI
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2166890.0AC216689.1 Populus trichocarpa clone POP101-J02, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011028304.10.0PREDICTED: uncharacterized protein At4g06598
TrEMBLA0A2K2AYE70.0A0A2K2AYE7_POPTR; Uncharacterized protein
TrEMBLU5GKB60.0U5GKB6_POPTR; Uncharacterized protein
STRINGcassava4.1_009724m1e-166(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51232637
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.23e-49bZIP family protein