PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG004583.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bHLH
Protein Properties Length: 288aa    MW: 31279.8 Da    PI: 6.3642
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG004583.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.34.3e-06249276330
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC CS
          HLH   3 rahnerErrRRdriNsafeeLrellPka 30 
                   +h+ +Er RR++i +++  L+el+P +
  CCG004583.1 249 NSHSLAERVRREKISERMRMLQELVPGC 276
                  58************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.77E-5244281No hitNo description
SuperFamilySSF474595.89E-8244278IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.55246288IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.9E-8247279IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MDGSGDKNGD LGYQNRVESV MKCPSSGMNT NPFYVSAWDP VVSLSQIGNF GGSSTGSQSE  60
FSNSSFPIVM ENPGISNTCH LVHYPSDSGF VELVPKFPGF GSGNFSEMVG SVGLTECGQI  120
VNAGCPPNYK EANNESTAHG AKRQEDQQLS EETTIGALPN GKRRRLVAES NSLFDPNKNA  180
EGEFQKDPSG ESSDIAKELD EKKQKVEQNC GANLRGKQVA KQAKDNPQSG EAPKDDYIHV  240
RARRGQATNS HSLAERVRRE KISERMRMLQ ELVPGCNKVL KCGLPFLM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161165KRRRL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011013278.10.0PREDICTED: transcription factor bHLH74-like isoform X1
RefseqXP_011013279.10.0PREDICTED: transcription factor bHLH74-like isoform X2
TrEMBLA0A2K2AGW60.0A0A2K2AGW6_POPTR; Uncharacterized protein
TrEMBLB9H6N30.0B9H6N3_POPTR; Uncharacterized protein
STRINGPOPTR_0005s19020.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF75853345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.15e-41bHLH family protein