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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
CCG004543.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
GATA |
Protein Properties |
Length: 135aa MW: 14384.4 Da PI: 10.7812 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
CCG004543.1 | genome | LZU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 58.6 | 8.4e-19 | 16 | 49 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
C+ Cgt+kTplWR gp g+k+LCnaCG++ rkk+
CCG004543.1 16 CADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKK 49
********************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 135 aa
Download sequence Send
to blast |
MSSKSLETES PLKKTCADCG TSKTPLWRGG PAGPKSLCNA CGIRSRKKKR DILGLSKGGA 60 AANDKRAKKG SSNNGSSNYN SNNKQLGDGL KQRLLALGRE VLVQGSTVER RRRKLGEEEQ 120 AAVLLMALSY GSVYA
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250}. |
Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Behringer C,Bastakis E,Ranftl QL,Mayer KF,Schwechheimer C
Functional diversification within the family of B-GATA transcription factors through the leucine-leucine-methionine domain. Plant Physiol., 2014. 166(1): p. 293-305 [PMID:25077795] - Ranftl QL,Bastakis E,Klermund C,Schwechheimer C
LLM-Domain Containing B-GATA Factors Control Different Aspects of Cytokinin-Regulated Development in Arabidopsis thaliana. Plant Physiol., 2016. 170(4): p. 2295-311 [PMID:26829982]
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